Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01493 ATGGAAGATCATCCACCTGGGTTTCGTTTCTTCCCAACAGAAGAAGAGCTTGTTGGCTTCTACCTACACAACAAGCTAGAAGGCCAAAGAAATGCCATAGCCATAGACAGAGTTATCCCAGTTATTGACTTCAATGGCGTTGAGCCTTGGAACCTTCCAACATTTGCTGGGGAGCTTTGTCGTGGAGACACGGAGCAATGGTTTTTCTTTTCGCCCGGTCAAGAGAGGGAAGCCAGGGGAGGGAGACCCAGCAGAACCACAGCTTGTGGGTATTGGAAAGCAACAGGTTCTCCTGGCTATGTTTACTCTTCTGATAACAAAGTCATTGGAGTGAAGAAATCCATGGTGTTCTACAAAGGGAAGGCCCCTATGGGAAGAAAAACCAAATGGAAGATGAATGAGTACAGAGCTATTCATATCCCTAACCAATCCACCCCTCAGTTGAGATGGGAATTCAGCTTGTGTCGGGTGTATGTCATATCGGGGAGCTTTCGAGCATTTGATCGACGACCATTAGAGAAAGATGGATCAGAATCACGTGCAAAAGTGGATGGATTGTGTTCTTCTGAAATTTCACACTTCGAGGGACTCCATGGCTCACACTCTCAGATGCTAGAAGTTAGAGAATCAAGTAGCACAAATTGGGATGTGAATAATAATAATAATGATAAAAGTAATAATGAGGTCCAACTCCAAGAACCGTTGTGGGAATTGGAATGGGAACAATTTAATTGGCTCTAA 741 0.4426 MEDHPPGFRFFPTEEELVGFYLHNKLEGQRNAIAIDRVIPVIDFNGVEPWNLPTFAGELCRGDTEQWFFFSPGQEREARGGRPSRTTACGYWKATGSPGYVYSSDNKVIGVKKSMVFYKGKAPMGRKTKWKMNEYRAIHIPNQSTPQLRWEFSLCRVYVISGSFRAFDRRPLEKDGSESRAKVDGLCSSEISHFEGLHGSHSQMLEVRESSSTNWDVNNNNNDKSNNEVQLQEPLWELEWEQFNWL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01493 246 Pfam No apical meristem (NAM) protein 5 136 IPR003441 GO:0003677|GO:0006355
Gma11g01493 246 Gene3D NAC domain 13 163 IPR036093 GO:0003677|GO:0006355
Gma11g01493 246 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
Gma11g01493 246 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 245 - -
Gma11g01493 246 ProSiteProfiles NAC domain profile. 4 160 IPR003441 GO:0003677|GO:0006355
Gma11g01493 246 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01493 Gma-Chr11 15735617 15737318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01493 7 245 NAC Transcription Factor Family AT5G22380 56.846 6.86e-84 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma11g01493 NAM 2.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01493 - - gmx:100781321 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01493 11 15735617 15737318 Gma11g01493 11 15735617 15737318 ECH
Gma12g00814 12 7596230 7597876 Gma11g01493 11 15735617 15737318 GST
Gma13g02796 13 42538116 42540521 Gma11g01493 11 15735617 15737318 PCT
Gma12g01754 12 38154434 38155737 Gma11g01493 11 15735617 15737318 PCT
Gma11g01493 11 15735617 15737318 Gma13g02796 13 42538116 42540521 PCT
Gma11g01493 11 15735617 15737318 Gma12g01754 12 38154434 38155737 PCT