Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01484 ATGCGGAAGGGCAGGGGTGGAGGAGCCTCGGCAACGGCGACGGTGGATGTGAACGGATCCATTTTAAAGGAGCCTCGGTACTGGGGCATGAGGAAGAGACTGTGGGGGAGATTCATGGTAGAGATTAGAGACCTGTTGAAGAAAGCCAGGGTTTGGTTGGGAACCTTCGATTCTGCTGAGGATGCTGCTCGTGCCTACGACATTGCCGCTCAAACTCTCCGAGTAGAAGAAGAAGAAGAGAAGGTGGTACCGCCTTCAATTCTCTTTTTCTCTCTCCATTTCTCATCCTCATCATCTTATTATTCCTTTTCCATCTCCATTCTCCATAACACCCAACACACCACTTGTGAAAAACCCCATTAA 363 0.4931 MRKGRGGGASATATVDVNGSILKEPRYWGMRKRLWGRFMVEIRDLLKKARVWLGTFDSAEDAARAYDIAAQTLRVEEEEEKVVPPSILFFSLHFSSSSSYYSFSISILHNTQHTTCEKPH 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01484 120 CDD AP2 25 74 IPR001471 GO:0003700|GO:0006355
Gma11g01484 120 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 7 1 76 - -
Gma11g01484 120 Pfam AP2 domain 25 74 IPR001471 GO:0003700|GO:0006355
Gma11g01484 120 ProSiteProfiles AP2/ERF domain profile. 26 95 IPR001471 GO:0003700|GO:0006355
Gma11g01484 120 Gene3D AP2/ERF domain 26 81 IPR036955 GO:0003700|GO:0006355
Gma11g01484 120 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 76 - -
Gma11g01484 120 SMART rav1_2 26 80 IPR001471 GO:0003700|GO:0006355
Gma11g01484 120 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Gma11g01484 120 PRINTS Ethylene responsive element binding protein signature 49 65 IPR001471 GO:0003700|GO:0006355
Gma11g01484 120 SUPERFAMILY DNA-binding domain 26 74 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01484 Gma-Chr11 15655820 15656182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01484 1 119 AP2-EREBP Transcription Factor Family AT3G20310 48.739 6.42e-29 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gma11g01484 AP2 1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01484 K09286 - gmx:100776538 196.052