Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01473 ATGCCGTCGCCAAGTGACGCGCCTCCTCTGCGAAGAAGCGTGTGGTTATTACGGATAAGGCTCGCGTCGGTGTTCAGGAATGACGTGGAGGGGTTATATGAGAAGCTTCTCGCTGGTGAGAGCAGCATCACCCCCATCGACCGCTTCGACGCCTCCAAGTTCCGCACGTGCTTTGGCAGCCAAATCCGCGGCTTCTCCGCCGAGGGCTACATCAACGACAAGAACGATCGCCGCTTCAACGACTGCCTCCACTACTGCATTGTCGCCGGCAAAAAGGCCCTCGAAAATGCCGACCTCACCCCAAACAAGCACTCCAAGGTCTCAGATCTATTCTCTCTTCCCACATTTCCTTCTTATTTTGTTAGTTTACATTTCCGTGAGACAATCCTTTTTGAGGCACTTTTTGCTGCTCTGGTACGGCGTTTGTTGACATGGAAAGGGGGAGAGGATGCCAACCATACCTATTTTAACAGCAAGGCTATGCTATGTTATGAGTTTAATGCAGAGGCAAATCATGATTTGTGTCCCAAGTGTATATATGCGTATGTCCCGTCGGTGATACTGATAAAGCGTCCTCCATATGAAGAACCCCTGGATTGGCCAACTCGGAAAAGAGTAGCTTTGGGATCTGCAATGGGTCTTTCATATTTGCATGATCATTGTGACCCAAAGATTATTCATCGTGATGTGAAGGCTGCCAACATATTGCTGGATGAAGAGTTTGAGGCTGTTGTTGGGGACTTTGGATTGGCCAAACTTATGGATTACAAGGACACGGTGAAAATTCAAAAAAACCTGGGGCTGCTCATAATGTTCGACTATATTCAATTGCTTCCACAAGGAAAGGAAGATCCTTCCAAGAATGGCATTTGTAGCAATTTTTTGTGTAACTCAAAGCCATGA 903 0.474 MPSPSDAPPLRRSVWLLRIRLASVFRNDVEGLYEKLLAGESSITPIDRFDASKFRTCFGSQIRGFSAEGYINDKNDRRFNDCLHYCIVAGKKALENADLTPNKHSKVSDLFSLPTFPSYFVSLHFRETILFEALFAALVRRLLTWKGGEDANHTYFNSKAMLCYEFNAEANHDLCPKCIYAYVPSVILIKRPPYEEPLDWPTRKRVALGSAMGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTVKIQKNLGLLIMFDYIQLLPQGKEDPSKNGICSNFLCNSKP 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01473 300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Gma11g01473 300 Gene3D - 19 111 IPR016039 GO:0016746
Gma11g01473 300 SUPERFAMILY Protein kinase-like (PK-like) 194 261 IPR011009 -
Gma11g01473 300 Pfam Protein kinase domain 204 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01473 300 Gene3D Transferase(Phosphotransferase) domain 1 151 269 - -
Gma11g01473 300 SUPERFAMILY Thiolase-like 26 106 IPR016039 GO:0016746
Gma11g01473 300 ProSiteProfiles Protein kinase domain profile. 43 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01473 300 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 187 266 - -
Gma11g01473 300 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1-RELATED 187 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01473 Gma-Chr11 15526008 15529995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01473 188 259 Receptor kinase-like Gene Family AT1G71830 90.278 2.70e-38 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gma11g01473 Pkinase 7.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01473 K13418 - gmx:100777573 286.574