Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01461 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGTAGAGGAGCATTTGGAGCTGCTATTCTTGTTCACCACAAGGCTGAGAAAAAGAAATATGTGTTGAAAAAAATAAGGCTTGCAAGGCAGACTGAACGATGCAGAAGATCTGCTCATCAAGAAATGGCTCTTATTGCTCGAATCCAGCACCCTTACATTGTGGAATTCAAGGAGGCATGGGTTGAGAAGGGTTGCTATGTCTGCATTGTCACTGGATACTGTGAAGGTGGAGACATGGCTGAATTGATGAAAAAATTAAACGGTGCTTACTTTCCTGAGGAGAAACTCTGCAAATGGTTCACTCAATTACTGTTGGCAGTAGATTACCTGCATTCGAATTATGTTTTACATCGTGACCTAAAGTGTTCCAACATCTTTCTTACCAAAGATCAGGATGTTCGCCTTGGGGATTTTGGGCTTGCTAAGACACTAAAAGCAGATGATTTGGCTTCTTCGGTGGTAGGAACTCCTAATTACATGTGTCCTGAACTGCTTGCTGATATTCCGTATGGATTCAAATCTGATATTTGGTCACTCGGGTGCTGTATATACGAGATGGCTGCTCATCGCCCTGCCTTTAAAGCTTTTGATATGGCAGGACTGATAAGCAAAGTGAACCGTTCATCCATTGGCCCTTTGCCTCCATGTTATTCCCCTTCCTTGAAAACACTGATAAAGGGCATGCTAAGAAAAAATCCTGAGCATCGGCCGACAGCATCTGAGGTGTTAAAGCACCCTTATTTGCAGCCTTATGTGGATCAATATCGTCCGTCTTTCAGTCCTCCAACAACCTGTTCTCCTGTAAAACCAATTTCTGCTGTCAATGATCATCGAAAAAATATGGCTGAAAGTCAAAACAGTAATAGTTCAAGTAGTGACAAAGATACTTTGATGTCAAATGAGAAAAACATTGCAACAGCAGGACCAAAGTGTGATAACGAAGCCACTGAGATGGATCAAACATCAATCGATGATGATGGCTCAGATGAAGAAAGTGGTTCTTGTAATGTCAATGCCAAAACAGCTGAGCAAGAGGTGGTTGAACCATCTCATAACAAACACCATTCTAACGTTGAATCTAAGCAGCCAAAAACAATTAGAAATATAATGATGGCATTGAAGGAAGGAAAAGTTAGAGAAGCAACTTCTCCAATGAGAGGCAACCGCATAAAGCCTAGTGGCCTATCAACACAAAAAATAAGCACAGAGACATTATCTAAATTGCCTAAGCCTACTTTTATTGCTCCTAGTATGAAGCCTAATTTAGAATCACATGCTGCACTTGCAAGGGCAAGCCCTGACCCTGCAAAAAGAATGATGGGATCACATTATCCAAAGCATCAGATTCTGATGACAGAAGCCTCACCAAAAGTTAAAGCTAGACATGATTTCACTCCACCATCTGCACTTGTCAAACAAGTAGAAGGAGATGGAGTTTCTCCAAGGCCAAGACAAAGGACTCCCCCAAGCTTACTTAGAAGACCTTCATTTTCTGGAAGAATGAGGCTGGCTGGAATTGATGTTCCAAATGCAGCAAATGATACTGGGAAGCTAGGCACAAATAAAATAGTCCAGGAACCTCAGATGAGCCCTTGTCAATTGGCCAATGGCAATGTACCACATATTTCAAGACAGGTTACTACTAGAGAGCCTCAGAAGGCTTTTGAAAGAAGTTCCAAAGGATTGCAAACAGACAGCAGCAATTCTGCCTCATCTTCAGTTTCTATCCAAGGATGTGAACTTGCTGATGATGCAACAACTTTCATTGACATGAGAGAACAGATGCTTCCTAATCATGAGAAAGTAAACCACATTGTAGGTGTTGAATCATGTCCTGATAGGAGCCAACCTACAACTTGTGCACATTGTAAGATGGTTGAAAAAGTGCCTAAAGAAACCTGTGAGGTTTCCACGAATTTTCAGAATACTATTAGTAGTAATGAGAAAGTGAGTTCCAGTTTAACTCTAGATCACCACCATGTTGAAGATTCTAAGGTAACACTTGCTTCAGAAGGTGGTCTTGTCATAAACAAGACAACTACATCTACTACTACCTCCAACTGTGATGATAGATCTGTAGAACCCTCTGCTGGAGCCACCAAAgaaataaaagattttcaagatatttccaaggaaatgcctttaaccaagtctcctaaggaaatcaaggattttcaagatatttccaaggaaatgcctttaaccaagtctccAAAACAAGCACCCCCAAGTTCTGGAGAAAAATCTGTTCATGTAGAAGTTAGTCCAGTAAGTGAACCAGATATAGTTAGCCAGCCAACACTTGGATGCAAGCCCCCTGGTGATGACAAATTCACAGTGAGGGAGCGACTGTCACCGGTGGCTGAAACTGTTCCTGTGGTCACCACTACTAAATCATCAAGCCAGAAAGTCTTGCAAGAGAAAGGAACTTTGTTGCAGAATCCAGCACAAGAAAGGCCTGACACTGGCCATCTTCCTCCAGCCTTTGATGATGTTATCCATGTCATACGCCACAGTAGTTACCGCGTTGGAAGTGAGCAACCAGTGAAGGAATCTGTGGAGATGGGAGTTCAAAATGTAGATGTTGGTAAGTTCATCAATGTAGTGAGGGATGATTTAGAAATGAGGAACATAACCTCACCTTTGACCCCCCTCAAATCTTCAAGTTGCTCTGATGCTGCAAGCTTGAAATCAAACATTTCTGATCAGCCGGAAACGAAGAACTCGAACACTCCTCCAATCCTTAAATCTTCAAGTCTCTTCGATGCTTCGAGCATGAAATCCAGCATTTCTGATTATCCAGGTCTTAAGAAACAAGATGTGAGTAACCCTCCTCCTTTAGTTTCAGAACCTGATTCTGCTGAGGCCAGTAAATGCAACACTCCTGTAAATGAAGAGAAACTACCGGTGGCAAAGGAAACATTGGATGTGAAATCTTTCAGGCAGAGAGCAGAGGCACTTGAAGAGCTCTTGGAGTTGTCTGCAGAGTTGCTGCAGCAAAACAGATTGGAGGAACTTCAAGTTGTTCTGAAGCCCTTTGGGAAAGACAAGGTCTCTCCAAGGGAGACAGCCATTTGGTTAGCCAAGAGTCTCAAAGGAATGATGTCTGAGGAAAGTGGGGGACGCTCTTCATGA 3177 0.412 MESRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKLNGAYFPEEKLCKWFTQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKVNRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRPTASEVLKHPYLQPYVDQYRPSFSPPTTCSPVKPISAVNDHRKNMAESQNSNSSSSDKDTLMSNEKNIATAGPKCDNEATEMDQTSIDDDGSDEESGSCNVNAKTAEQEVVEPSHNKHHSNVESKQPKTIRNIMMALKEGKVREATSPMRGNRIKPSGLSTQKISTETLSKLPKPTFIAPSMKPNLESHAALARASPDPAKRMMGSHYPKHQILMTEASPKVKARHDFTPPSALVKQVEGDGVSPRPRQRTPPSLLRRPSFSGRMRLAGIDVPNAANDTGKLGTNKIVQEPQMSPCQLANGNVPHISRQVTTREPQKAFERSSKGLQTDSSNSASSSVSIQGCELADDATTFIDMREQMLPNHEKVNHIVGVESCPDRSQPTTCAHCKMVEKVPKETCEVSTNFQNTISSNEKVSSSLTLDHHHVEDSKVTLASEGGLVINKTTTSTTTSNCDDRSVEPSAGATKEIKDFQDISKEMPLTKSPKEIKDFQDISKEMPLTKSPKQAPPSSGEKSVHVEVSPVSEPDIVSQPTLGCKPPGDDKFTVRERLSPVAETVPVVTTTKSSSQKVLQEKGTLLQNPAQERPDTGHLPPAFDDVIHVIRHSSYRVGSEQPVKESVEMGVQNVDVGKFINVVRDDLEMRNITSPLTPLKSSSCSDAASLKSNISDQPETKNSNTPPILKSSSLFDASSMKSSISDYPGLKKQDVSNPPPLVSEPDSAEASKCNTPVNEEKLPVAKETLDVKSFRQRAEALEELLELSAELLQQNRLEELQVVLKPFGKDKVSPRETAIWLAKSLKGMMSEESGGRSS 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01461 1058 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01461 1058 MobiDBLite consensus disorder prediction 747 768 - -
Gma11g01461 1058 Gene3D Transferase(Phosphotransferase) domain 1 90 343 - -
Gma11g01461 1058 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01461 1058 MobiDBLite consensus disorder prediction 479 509 - -
Gma11g01461 1058 MobiDBLite consensus disorder prediction 695 717 - -
Gma11g01461 1058 MobiDBLite consensus disorder prediction 319 349 - -
Gma11g01461 1058 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Gma11g01461 1058 MobiDBLite consensus disorder prediction 571 589 - -
Gma11g01461 1058 MobiDBLite consensus disorder prediction 559 589 - -
Gma11g01461 1058 MobiDBLite consensus disorder prediction 356 375 - -
Gma11g01461 1058 CDD STKc_Nek 7 262 - -
Gma11g01461 1058 MobiDBLite consensus disorder prediction 945 978 - -
Gma11g01461 1058 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Gma11g01461 1058 SUPERFAMILY Protein kinase-like (PK-like) 4 309 IPR011009 -
Gma11g01461 1058 MobiDBLite consensus disorder prediction 894 932 - -
Gma11g01461 1058 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Gma11g01461 1058 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 967 1041 - -
Gma11g01461 1058 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 891 - -
Gma11g01461 1058 MobiDBLite consensus disorder prediction 360 375 - -
Gma11g01461 1058 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 967 1041 - -
Gma11g01461 1058 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 891 - -
Gma11g01461 1058 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01461 1058 Coils Coil 984 1021 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01461 Gma-Chr11 15356809 15362777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01461 14 263 MAP Kinase Kinase Kinase AT1G53570 31.373 1.50e-36 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Gma11g01461 Pkinase 2.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01461 K08857 - gmx:100818747 2009.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01461 11 15356809 15362777 Gma11g01461 11 15356809 15362777 ECH
Gma12g00836 12 7812115 7818477 Gma11g01461 11 15356809 15362777 GST
Gma13g02781 13 42372973 42379932 Gma11g01461 11 15356809 15362777 PCT
Gma12g01772 12 38311437 38319113 Gma11g01461 11 15356809 15362777 PCT
Gma11g01461 11 15356809 15362777 Gma13g02781 13 42372973 42379932 PCT
Gma11g01461 11 15356809 15362777 Gma12g01772 12 38311437 38319113 PCT