Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01456 ATGGGGTTTTTGCTCAAAGAGGCTTTGAGGACTCTGTGCTCAAGGAATCGCTGGTCTTATGCCATTTTTTGGAAGATCGGTTGCAATAATTCCAAGCTGTTAATCTGGGAAGATTACTACTATGAACCCTTGCCATCTCCTTTCCCACCACGAGATGGGGAAGGATGCTGGTTTTCTTCGGAGTCTCAGCTTATTCAGGAGGAGGACAGAGTCTGTGTATTGATTAACAAAATGATGGTGAATAATTCAGTCAGTATTGCTGGAGAAGGGATAGTTGGACGGGCGGCATTTACAGGAAACTATCAGTGGATTCTTTTGAACAATTTCACTAGAGATGCTTATCCGCCAGAGGTATATCCTGAGTTGCATTACCAATTTTCAGCTGGAATGCAGACGGTGGCAGTTATTCCTGTGCTTCCCCATGGGGTTGTTCAACTAGGTTCTTTCTTGCCGATAATGGAAGATATAGGATTTGTGAATGATGTAAAGAACTTGTTCTTGCAATTGGGATGTGTACCTGGTGCCCTTCTATCTGAAGACTATTCAGCAAAGGTTTCTAATAAAAAATTTGCTGGACCTGTGACTGTTAATCCACCTCTCATTACTTCAGATTGCACTCCCTCGGTAGCTAATGGTTCCAACCAACTTACTAATTCTCCTCTTGCTTCAAGGCCTGTTGCTCAGCCACCTTATCCTCTAAGGGGAGGAATAAATAATTACCAGGGTTCTTTATTGACACCTCAAGCCCATAACCCGAACCAGATATTTGATGGCATTTGCCAACCAAAGGCTCATTCAATGATCAAAACAAATGTCTGTGGCCAACCAAAGAAGACCGTTGTTGAGGCTGAAGCTAAAGTGATACCTGCAAATTTTGATTCATGTCTGCAACAGCATTCTGTTTATAATGCTAGATCTGAATTCAATGAGTTATCTAGTTTCAATCAATCAAATCTGAGTGACTGCTGCCTTAAATATATTGAACAACAAACATCAGGTGTTGGGAGACAGAGTCATGTTAATCCTAACATGAATTTATCAAGTGCCTTAAATATGCCTCTACTAAAAACCAATGGAGGAAAAATTCTGCAACAGAATCAGAGTTCTAGTAGCAGTTCACTACTTGGAGGAATCCCAATATGTAGTGGGAGTAATCTTTTGAGGACAAATATGATTAACTGCTCAGTTTCAAATCCTCCCAAAGTATCCACTTCTGATTTTTCTGGAACACACAAGGTTGGGTTTGGTCTTCAAAGTAACAATGCAACAACTAATGCTGGGCTTTGTTCTGTGCCTAATTTCACTAATCAATCAGTTACCAGTCACATGAATCTAGAAGGCTCTGATCAGAAGAATCAAGCATATGATGCTTTCGCTTCAGCTGATCAAAGGCAAGATGATGATTTGCTTCAGGCTGCTCTTAAGATTCCATCTCTTAATCTTGAGGAGCATGTGCCTATGGGTGATCAAATCCCTGGTTTTGTTCAAGATTGCCTCAATAAAGATGTTACCAGTCAACATATGATGAAAATGAATGTTAAGCATGAAGAAGCCTATGCTCAACTTCCATCTGGTGATGACCTCTTCGATGTTTTAGGTATGGATTTGAAAAGGAGACTACTCAATGGAAGCTGGAATAAGTTGCTTGCCACAGATTCAGATGACAACACAGAACATCTAGATAAAAAGGCAACATGCATGAATTTGCAAGGTGTAGGTCCTGATAATAGTTATTCAGTTAATGAAGCAATATCAGAAAGTGGCATCTTCTCTGGAACAGGCACAGACCACCTTTTAGATGCTGTGGTTTCAAAAGCTCAATCTTCTGCAAAACAGAATTATGATGAAATGTCATGCAGGACAACATTGACAAGGATTAGTACAGCCTCCATTCCTTCTCCTGTCTGCAAGCAAGTTATGCCTGATCATGTTGTCCCAAGGGGATTGTTTGATTTTCCTAAGACCGGAGTTAAAACAGCTGCTGCTGAAACAAGTTCTCTTAGGTCTGGGTGTAGCAAGGATGATGCTGGAAACTGCTCTCAAACTACTTCCATATATGGGTCTAAGCTTAGTTCATGGGTTGAGAATAGTAGTAATGTGAAACGTGAAAGCAGTGTTTCAACTGGATACTCCAAGCGACCAGATGAAGTTTGCAAATCAAATCGTAAAAGACTTAAACCTGGAGAGAACCCTAGGCCTCGGCCTAAAGATCGCCAAATGATTCAAGATCGTGTAAAAGAGTTGCGGGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGCACTTCTGGAAAAGACCATCAAGCATATGCTTTTCCTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACAGACAGGGGAGTCTAAGATAGTTAGTAAAGAAGGTGGATTGCTATTAAAAGATAACTTTGAGGGAGGGGCTACATGGGCATATGAGGTTGGCTCGCAATCAATGGTTTGTCCAATCATTGTTGAAGATCTCAATCCTCCTCGTCAGATGCTAGTAGAGatgctttgtgaggaacggggtttctttctggaaatagccgacttaatcagaggattaggtttaacaatcttgaagggggtcatggaagctcgcaatgacaagatctgggcacgctttgctgttgagGCAAACAGGGATGTAACGAGGATGGAAATATTTATGTCACTGGTTCGTCTTTTGGATCAAACAGTGAAGGGCGGTGGTGCATCTTCATCGAATGCAATTGATAACAACATGATGGTGTATCAATCTTTCCCACAAGCTACCCAGATAACAGCAACTGGTAGGCCCAGTAGTTTGCAATGA 2820 0.3929 MGFLLKEALRTLCSRNRWSYAIFWKIGCNNSKLLIWEDYYYEPLPSPFPPRDGEGCWFSSESQLIQEEDRVCVLINKMMVNNSVSIAGEGIVGRAAFTGNYQWILLNNFTRDAYPPEVYPELHYQFSAGMQTVAVIPVLPHGVVQLGSFLPIMEDIGFVNDVKNLFLQLGCVPGALLSEDYSAKVSNKKFAGPVTVNPPLITSDCTPSVANGSNQLTNSPLASRPVAQPPYPLRGGINNYQGSLLTPQAHNPNQIFDGICQPKAHSMIKTNVCGQPKKTVVEAEAKVIPANFDSCLQQHSVYNARSEFNELSSFNQSNLSDCCLKYIEQQTSGVGRQSHVNPNMNLSSALNMPLLKTNGGKILQQNQSSSSSSLLGGIPICSGSNLLRTNMINCSVSNPPKVSTSDFSGTHKVGFGLQSNNATTNAGLCSVPNFTNQSVTSHMNLEGSDQKNQAYDAFASADQRQDDDLLQAALKIPSLNLEEHVPMGDQIPGFVQDCLNKDVTSQHMMKMNVKHEEAYAQLPSGDDLFDVLGMDLKRRLLNGSWNKLLATDSDDNTEHLDKKATCMNLQGVGPDNSYSVNEAISESGIFSGTGTDHLLDAVVSKAQSSAKQNYDEMSCRTTLTRISTASIPSPVCKQVMPDHVVPRGLFDFPKTGVKTAAAETSSLRSGCSKDDAGNCSQTTSIYGSKLSSWVENSSNVKRESSVSTGYSKRPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTVKGGGASSSNAIDNNMMVYQSFPQATQITATGRPSSLQ 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01456 939 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 725 774 IPR011598 GO:0046983
Gma11g01456 939 MobiDBLite consensus disorder prediction 697 739 - -
Gma11g01456 939 CDD bHLH_AtLHW_like 729 798 - -
Gma11g01456 939 MobiDBLite consensus disorder prediction 697 711 - -
Gma11g01456 939 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Gma11g01456 939 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 939 - -
Gma11g01456 939 MobiDBLite consensus disorder prediction 715 739 - -
Gma11g01456 939 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 939 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01456 Gma-Chr11 15239252 15245419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01456 526 910 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 54.987 5.54e-121 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01456 - - gmx:100812899 1871.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01456 11 15239252 15245419 Gma11g01456 11 15239252 15245419 ECH
Gma12g00842 12 7927738 7935707 Gma11g01456 11 15239252 15245419 GST
Gma13g02775 13 42338522 42345630 Gma11g01456 11 15239252 15245419 PCT
Gma12g01783 12 38407007 38413891 Gma11g01456 11 15239252 15245419 PCT
Gma11g01456 11 15239252 15245419 Gma13g02775 13 42338522 42345630 PCT
Gma11g01456 11 15239252 15245419 Gma12g01783 12 38407007 38413891 PCT