Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01447 ATGGATACGGACACGGGAAGGAAGAAACCGAGGGAGAATGAGAACCTCGGCTCCCCGATGTTGTGTATCATGGGTCACGTAGATACCGGCAAAACCAAGCTCTTGGATTGTATTCGTGGAACAAATGTTCAGGAGAGGGAACTAATCAATGCAAAGCTGAATCCTCCTGGTCTACTTGTTCTTGATACCCCAGGGCACGAGTCATTTACTTACTATAGGTTTATGGCTTCTCTTCTATGTGATTTTGCAATTTTGGTTGTTGACACTTTGCATGGGTTAGAGCAACAAACACTAGAATCCCTTTATCTATTAAGAGGCATGAATAAAAAATTCATTGTTGTCTTGAATAATGTTGACAAGCTTCGTGGGTGGAAACCATGTCACAATACTCCAATCACTGAAGCAGTGGAGCAGCAGACTCAGGATGTTCAACTTAAGTTTAATGGGTTGCTTGATGATATTACTTATCTGTTCGAACAAGTGGGACCGAGTACTCAGTATCTGAATACTGAGTTGCTGAATACTGAAAACATTGCAATTAATGGGAGACATGTTCAGCATTGTGCCTACAATGGTGAAGGAATTCCTGAATTGTTATCACTATTGGTTCAATGGACCCAAAAAACAATGGCTCAGAAACTTACATGCAGTGAAAAATTGCAGTGTACTGTTTTAGATGTGGAGGTAGTAGAAGACCATGGAACTACTATTGATTTTGTTTTAGTTAATGGTGTTCTTCACGAAGTAGAACAAATAGTTGTCTGCGGAATGCCGGGGCCAATTGTCACCACAATCCAAGCTTTATTGGCACCTCATCCAATAAAGGAACTCTGTGTCAAGATTGGAACTCCAATCTGCATTCCTTCCAGAGAGTTCATTGATATTGGTCGCGTTGCCTCCATTGAGAATAACCATCTACCTGTTGATTATGCAAGGAAGGGGCAGAAAGTAGCCATTAAGGAAGCAAAAAGATTATACCTTTTGCACAATGTTGAAAAGGAAAAAAGATCATTAATAAAAATTAGCGTACCCCCGTGCCAGAAGGCACCTCATAGTCCTCGCTATGCGAAGATACCAGGGCGGGTCATTGTAGGCATGCACCTTTTGCTTTCATATGCAAAAAGCCACCTTGCTGTTATGCTCCAATTTCTTTTACAGATTGTTGGTAGCAATCCTGGACTTGATGATCCTCTTCTAGAGGATTGA 1206 0.4129 MDTDTGRKKPRENENLGSPMLCIMGHVDTGKTKLLDCIRGTNVQERELINAKLNPPGLLVLDTPGHESFTYYRFMASLLCDFAILVVDTLHGLEQQTLESLYLLRGMNKKFIVVLNNVDKLRGWKPCHNTPITEAVEQQTQDVQLKFNGLLDDITYLFEQVGPSTQYLNTELLNTENIAINGRHVQHCAYNGEGIPELLSLLVQWTQKTMAQKLTCSEKLQCTVLDVEVVEDHGTTIDFVLVNGVLHEVEQIVVCGMPGPIVTTIQALLAPHPIKELCVKIGTPICIPSREFIDIGRVASIENNHLPVDYARKGQKVAIKEAKRLYLLHNVEKEKRSLIKISVPPCQKAPHSPRYAKIPGRVIVGMHLLLSYAKSHLAVMLQFLLQIVGSNPGLDDPLLED 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01447 401 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5B 7 280 - -
Gma11g01447 401 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5B 275 321 - -
Gma11g01447 401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 280 IPR027417 -
Gma11g01447 401 SUPERFAMILY Translation proteins 279 320 IPR009000 -
Gma11g01447 401 Gene3D - 4 215 IPR027417 -
Gma11g01447 401 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 275 321 IPR015760 -
Gma11g01447 401 Pfam Elongation factor Tu GTP binding domain 55 207 IPR000795 GO:0003924|GO:0005525
Gma11g01447 401 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 7 280 IPR015760 -
Gma11g01447 401 Gene3D Translation factors 216 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01447 Gma-Chr11 14987827 14993144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01447 276 329 Eukaryotic Initiation Factors Gene Family AT1G76810 63.333 2.40e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01447 K03243 - gmx:100814640 323.168