Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01439 ATGGACGTTGATTCCTCGATGGTGCCGGAGCCCGATCACGATCCGCCGGTGCAGAACCATGCCGAGAGAGACCAGCTAGGAGACTCACCGTCGCCGTCGTTGTCGGAGGGGGGCGGATCTCTGGCTCAGTCGCCGCCTCAACAACAGCAGCAGCAGCAGCAACAGCCGCCGCCGGCCACGGCGGCTCAGGTGCACCAGCCCAATTCTCTGGTTGGTCCGAGGCTCGCGCCGACATACTCAGTGGTAAATGCGATTTTGGAGAAGAAGGAGGACGGGCCCGGGCCGCGGTGCGGCCACACGTTGACGGCGGTGGCGGCGGTCGGAGAGGAGGGGACGTCGGGGTACATTGGTCCGAGGCTGATTTTGTTCGGCGGTGCCACTGCCCTTGAAGGGAATTCCGCGGCCTCAGGGACTCCTTCATCCGCCGGAAATGCTGGCATACGTTTAGCTGGTGCCACTGCTGATGTCCACTGTTATGATGTCATAAGTAATAAATGGTCTAGGATAACTCCCATTGGCGAGCCTCCAACCCCAAGGGCTGCACATGTGGCAACTGCTGTGGGTACCATGGTAGTTATTCAGGGTGGCATTGGCCCTGCTGGTTTGTCTGCAGAGGACCTTCATGTTCTTGATCTCACACAGCAACGGCCACGATGGCATAGAGTTGGTGTTCCTGGCCCTGGACCGGGACCACGCTATGGACATGTTATGGCTTTGGTGGGGCAGAGGTATCTCATGGCAATCGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCCGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCACCTCCATGCATGTATGCAACTGCCAGTGCACGCTCTGATGGGCTTCTTCTGCTTTGTGGAGGGAGGGATGCCAATAGTGTTCCATTGTCAAGTGCATATGGACTTGCTAAGCATAGAGATGGTCGTTGGGAATGGGCCATTGCCCCTGGTGTCTCGCCATCTCCAAGATATCAGCATGCAGCGGTATTTGTTAATGCAAGGCTCCATGTGTCTGGTGGGGCCCTTGGAGGAGGACGGATGGTTGAAGATTCATCGAGTGTTGCAGTGTTGGACACTGCTGCTGGTGTTTGGTGTGATACCAAATCTGTTGTTACCAGTCCAAGAACGGGTAGATACAGCGCTGATGCAGCAGGTGGAGATGCTGCAGTTGAGTTGACACGGCGTTGTAGGCATGCGGCTGCTGCTATTGGCGACTTAATTTTTATTTATGGTGGTTTACGTGGCGgtgtcttgctggatgacctacttgttgctgaagatcttgctgctgctgaaacaacaactgctgcttcacatgctgcAGCAGCAGCAGCTGCGTCTAATGTACAAGCTGGACGGCTACCTGGACGGTATGGATTTATTGATGATAGAACAAGGCAAACCATGCCCGAAGCAGCTTCTGATGGTTCAGTAGTTTTGGGAAATCCAGTTGCCCCCCCTGTAAATGGCGATATGTATACTGATATCAGCACTGAAAATGCCTTGCTCCCGGGAACTAGGCGAACGAGCAAAGGAGTTGAGTATCTAGTTGAAGCATCAGCTGCGGAAGCTGAAGCTATCAGTGCCACACTGGCTGCTGCTAAGGCACGGCAAGTGAACGGTGAAGTGGAATTGCCTGACCGAGACCGTGGGGCTGAGGCAACACCTAGTGGGAAACAGATATCTTCCTTGATTAAGCCTGATTCTGCTGGGTCAAATAGCATTCCTCCTGGTGGAGTGAGGCTGCATCACAGAGCTGTGGTTGTTGCTGCAGAGACTGGTGGAGCATTAGGTGGCATGGTTAGACAGCTTTCAATTGATCAGTTTGAGAATGAAGGCAGGCGGGTCAGTTATGGGACTCCTGAAAGTGCAACAGCTGCTAGAAAATTATTAGACCGGCAGATGTCTATCAATAGTGTCCCAAAGAAGGTAGTTGTAGCTCACCTTTTAAAGCCTCGTGGCTGGAAACCGCCCGTTCGCCGACAGTTTTTCTTAGACTGCAATGAAATTGCAGATCTTTGTGATAGTGCAGAACGCATATTTTCAAGTGAACCGAGTGTCTTACAGCTTAGGGCTCCAATTAAAATATTTGGTGATTTGCATGGGCAATTTGGAGATCTCATGCGCCTCTTTGAAGAGTATGGTGCACCATCAACTGCTGGTGACATAGCATATATCGACTATCTATTCCTCGGAGATTATGTTGATAGGGGCCAACACAGCCTGGAAACTATTAGCCTTCTGCTTGCTCTGAAGGTTGAGTATCCAAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTCCGAATTGAGTGCATTGAGAGGATGGGTGAGAGAGACGGAATTTGGACATGGCACCGTATAAACCGTCTGTTTAATTGGcttcctctagcagccctaattgagaaaaaaattatttgcatGCATGGGGGTATTGGTCGTTCAATAAATCATGTGGAACAAATTGAGAATATTCAGCGTCCAATTACGATGGAAGCAGGATCAATTGTGCTTATGGATCTATTATGGTCTGATCCTACAGAGAATGACAGTGTTGAAGGACTGCGACCAAATGCTAGGGGTCCAGGATTAGTCACTTTTGGGCCTGATCGTGTAATGGAATTTTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCCCAGGGACATTTGATCACACTTTTCTCTGCTACAAACTACTGTGGTACGGCAAATAATGCTGGGGCAATATTAGTTTTGGGTAGAGATCTCGTTGTGGTTCCTAAATTGATTCATCCATTACCGCCTGCAATTTCTTCACCAGATACGTCACCAGAACGTCATATTGAGGATACATGGATGCAGGAGTTGAATGCTAACAGACCACCAACACCAACTAGAGGCCGTCCTCAAGTAACAAATGACCGAGAAAGCTTGAAGGACCAAGCTTTCATTTGTCCTGGTTCTCATCACTCGATCATCTGGCCTGTAGAAGATCCAAGTCCGAGAAGCAAAGCAAAGTTGGTAGCCACTGCTAAGTTGGTTCACTTTGACAAAAGCTAG 3150 0.4829 MDVDSSMVPEPDHDPPVQNHAERDQLGDSPSPSLSEGGGSLAQSPPQQQQQQQQQPPPATAAQVHQPNSLVGPRLAPTYSVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTSGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVISNKWSRITPIGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQAGRLPGRYGFIDDRTRQTMPEAASDGSVVLGNPVAPPVNGDMYTDISTENALLPGTRRTSKGVEYLVEASAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSAGSNSIPPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVVVAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFEEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPDTSPERHIEDTWMQELNANRPPTPTRGRPQVTNDRESLKDQAFICPGSHHSIIWPVEDPSPRSKAKLVATAKLVHFDKS 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01439 1049 Gene3D - 203 464 IPR015915 GO:0005515
Gma11g01439 1049 MobiDBLite consensus disorder prediction 24 67 - -
Gma11g01439 1049 MobiDBLite consensus disorder prediction 1 74 - -
Gma11g01439 1049 ProSitePatterns Serine/threonine specific protein phosphatases signature. 777 782 IPR006186 GO:0016787
Gma11g01439 1049 SUPERFAMILY Metallo-dependent phosphatases 662 970 IPR029052 -
Gma11g01439 1049 CDD MPP_Bsu1_C 660 962 IPR041758 -
Gma11g01439 1049 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1005 - -
Gma11g01439 1049 SUPERFAMILY Kelch motif 151 440 IPR015915 GO:0005515
Gma11g01439 1049 Pfam Calcineurin-like phosphoesterase 708 915 IPR004843 GO:0016787
Gma11g01439 1049 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 1005 - -
Gma11g01439 1049 MobiDBLite consensus disorder prediction 557 593 - -
Gma11g01439 1049 PIRSF STPPP_BSU1 44 1011 IPR012391 GO:0004721|GO:0009742
Gma11g01439 1049 PRINTS Serine/threonine phosphatase family signature 743 770 IPR006186 GO:0016787
Gma11g01439 1049 PRINTS Serine/threonine phosphatase family signature 708 735 IPR006186 GO:0016787
Gma11g01439 1049 PRINTS Serine/threonine phosphatase family signature 926 942 IPR006186 GO:0016787
Gma11g01439 1049 PRINTS Serine/threonine phosphatase family signature 844 871 IPR006186 GO:0016787
Gma11g01439 1049 PRINTS Serine/threonine phosphatase family signature 776 800 IPR006186 GO:0016787
Gma11g01439 1049 PRINTS Serine/threonine phosphatase family signature 814 840 IPR006186 GO:0016787
Gma11g01439 1049 PRINTS Serine/threonine phosphatase family signature 904 924 IPR006186 GO:0016787
Gma11g01439 1049 Pfam Kelch motif 337 383 IPR011498 GO:0005515
Gma11g01439 1049 Gene3D - 77 202 IPR015915 GO:0005515
Gma11g01439 1049 Gene3D - 642 985 IPR029052 -
Gma11g01439 1049 Pfam Galactose oxidase, central domain 231 284 - -
Gma11g01439 1049 MobiDBLite consensus disorder prediction 571 585 - -
Gma11g01439 1049 SMART pp2a_7 680 964 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01439 Gma-Chr11 14898384 14912424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01439 672 907 Calmodulin-binding Proteins AT5G63870 29.044 7.52e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01439 - - gmx:100816091 1878.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01439 11 14898384 14912424 Gma11g01439 11 14898384 14912424 ECH
Gma11g01439 11 14898384 14912424 Gma12g00849 12 8123788 8137007 ECH
Gma12g00849 12 8123788 8137007 Gma11g01439 11 14898384 14912424 GST
Gma13g02766 13 42235122 42246731 Gma11g01439 11 14898384 14912424 PCT
Gma12g01791 12 38516183 38527474 Gma11g01439 11 14898384 14912424 PCT
Gma11g01439 11 14898384 14912424 Gma13g02766 13 42235122 42246731 PCT
Gma11g01439 11 14898384 14912424 Gma12g01791 12 38516183 38527474 PCT