Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01422 ATGGCATCTTCGAACCCACCATGTGCGGCTTGCAAGTTCCTGCGGAGAAAGTGCCAACCCGAATGCGTGTTCGCGCCATACTTCCCACCGGACCAGCCTCAGAGGTTCGTCAACGTGCACAGAATCTTCGGAGCCAGCAATGTCTCGAAGCTTCTCAATGAGTTGCACCCTCACCAGCGCGAAGACGCAGTGAATTCTCTAGCCTACGAAGCCGAAATGCGCCTCCGAGACCCTGTTAATGGGTGTGTTGGAATCATCTCTCTTCTTCACCAGCAGCTTCGCCAGCTCCACATGGACCTCCAGAGTGCCAAATTTGAGCTCTCAAGGATCCATAACTTGGGTGTAACCATACCCACTGGATACGGTCACACTTCTGCTGCGGTTATCACGCCCGTTAGCGCCTCTCATGTTATGAATGGTGCTGATGGTAGCTATGATAACCGCTATTATAACCAACAACATAGTTATCATCAGTGTGTGCCTCAGCAGTTAGTTAGGAACTTTGTTGGTGCAGGGAACAACTGTGATGAGGGTAATGTGTTGGCCATAAACATTGCTAGTTTTGGGCCATTGAGTCAGCTCCAGCAGCCTAGTGCTGCTGCTGTTGCTCGTGATGACCCTCACACTAGGGTTCATCACTCTTAG 645 0.5101 MASSNPPCAACKFLRRKCQPECVFAPYFPPDQPQRFVNVHRIFGASNVSKLLNELHPHQREDAVNSLAYEAEMRLRDPVNGCVGIISLLHQQLRQLHMDLQSAKFELSRIHNLGVTIPTGYGHTSAAVITPVSASHVMNGADGSYDNRYYNQQHSYHQCVPQQLVRNFVGAGNNCDEGNVLAINIASFGPLSQLQQPSAAAVARDDPHTRVHHS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01422 214 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Gma11g01422 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 147 - -
Gma11g01422 214 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Gma11g01422 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01422 Gma-Chr11 14639320 14639964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01422 2 201 AS2 family AT1G65620 58.416 9.25e-63 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma11g01422 LOB 3.2e-41 No_clan