Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01418 atggttcaacaagcttattggaatttggaggaacttcttatggtgggtcaagaaacacttcgaaaattgtctggattagttgggaaagagtatgctccctcaaagaaaaatgcggccttgggattaaaaatctctacctctttaatattagcctcttatctaagtggagGTTTGCTCAACAAGTTTGGTGAAATCAATACCCTTTGTGACATTCAAGCATGTGCTATCATTTATACTCCGAATGAACCAGAGGCTAAGGTTTGGCCATCTGACCAGGGAGTGAATAGTGTGATTTCCAGGTTTATGGGAGCTTTTGAATTGGCAATAAGCAAGATAATGTTATGTCAAGAGAACCATTTAAAAAGAAACATAAACAAAGCCCAGGGGCAGCTAAAGAAATTGAGGAATGAAAACAAGAAGAAGGAGATTGACCTTTTCACGTGTCAATACTTTGCTG 457 0.2451 MVQQAYWNLEELLMVGQETLRKLSGLVGKEYAPSKKNAALGLKISTSLILASYLSGGLLNKFGEINTLCDIQACAIIYTPNEPEAKVWPSDQGVNSVISRFMGAFELAISKIMLCQENHLKRNINKAQGQLKKLRNENKKKEIDLFTCQYFA 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01418 152 Gene3D - 35 144 IPR036879 GO:0003677|GO:0046983
Gma11g01418 152 PANTHER AGAMOUS-LIKE-34-RELATED 56 143 - -
Gma11g01418 152 Coils Coil 117 144 - -
Gma11g01418 152 PANTHER MADS BOX PROTEIN 56 143 - -
Gma11g01418 152 SUPERFAMILY SRF-like 56 122 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01418 Gma-Chr11 14571960 14573072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01418 55 148 Type I MADS-box Gene Family AT1G31640 42.708 1.79e-19 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Gma11g01418 SRF-TF 0.00014 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01418 - - gmx:100783663 135.191