Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01412 ATGAAGATTTGTAGTCTCAGCTGGCCAATTCCAAGTCAAATAAGAACTGGATGGACAAGGCTTGAGAACCTAAATCTAGCAAGAACTCTAACAAGAGAGGCAAGTTTGAGTGTACCACTTGCAACAAAATTTTCCACTCATACCAAGCTTGGAGGCCATAGATCTAGCCACAAGAAGATCAAAGGATGCTTTGCCTCAAGGAATGAGAGCAGTGAGAGCAATGAGTGTGTGGTGGAACATCAACATGGTGCTAGTTTTCATAATGAGGTGGAAACAGTTAATGAGTCCAAGAAGAGCAAGGGGCATGAGTGCCCAATTTGCCTCAAGGTTTTTCCATGTGGCCAAGCCTTGGGTGGCCATAAGAGATCCCATATGGTTGTTGGGTTTGAGAGTAGAAGCTTTCAAACAATTGTGCTTCAGGAACCAGTGGCAGAAATTAGGGACTTCCTTGATCTTAATCTTCCTGCTGCTACTAAGGAAGAAAGCAATAGCCATGCTGACTCTAACAGTAACATACCCTGGTGGATAGTAGAAGAAAACCACAAACAGGAGGCACTGGTAGGCCTTATCTCATAG 576 0.4392 MKICSLSWPIPSQIRTGWTRLENLNLARTLTREASLSVPLATKFSTHTKLGGHRSSHKKIKGCFASRNESSESNECVVEHQHGASFHNEVETVNESKKSKGHECPICLKVFPCGQALGGHKRSHMVVGFESRSFQTIVLQEPVAEIRDFLDLNLPAATKEESNSHADSNSNIPWWIVEENHKQEALVGLIS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01412 191 ProSiteProfiles Zinc finger C2H2 type domain profile. 102 124 IPR013087 -
Gma11g01412 191 Pfam C2H2-type zinc finger 102 125 - -
Gma11g01412 191 ProSitePatterns Zinc finger C2H2 type domain signature. 104 124 IPR013087 -
Gma11g01412 191 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 43 191 - -
Gma11g01412 191 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 43 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01412 Gma-Chr11 14173320 14174478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01412 44 164 C2H2 Transcription Factor Family AT2G45120 38.710 2.22e-18 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01412 - - gmx:102669916 253.832