Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01402 ATGACATTCTCGGTTTGTGGAAAGCGTATTGTGCGAGGCGCAGTTGACATCGAGAAGGGTGCAGTGGGGCTCCGACAAGATGCTGAAGGCCGACGCGAGCTCCGACGGGATGATGGAAACGTGGTCCTCGATGCCGCAGTGCCTGTCATTCTTTGTGTTCCTAGTTGGGATGTCGAAGACAACCCACCACCCTCAAGAGTCTCTCTTCGCTCCAACTCCAATTCAACTGCCCCTGATGTTCCCATGTTGGACTACGAGGTTGCTGAGCTGACATGGGAAAATGGGCAACTTTCTATGCATGGCTTAGGGCTACCGCGTGTGCCGGTAAAACCACCAACAGCCGCCACGAATAAGTACACATGGGAGAAGCCTCGGGGAAGTGGCACCTTGGAGTCCATAGTGAACCAAGCCACGAGCTTTTCCCACCAGGAAAAGCCCAGACCGTTAAACGGAGACAGTGGTGGTGGTGGTGGAGTTTATGGGAACTTCATGGTCCCATGGTTCGACCCTCATGCTGCCGCCACCACTACGACCACCACCACGAACACCATGACGATGGACGCGTTGGTGCCATGCTCGAACCGGGAGCAGGGCAAGAAGAAGGGTATGGAGTCGGGGCCCGGCACGTGCATGGTGGGGTGCTCCACCCGTGTGGGGTCATGCTGCGGGGGGAAGGGGGCGAAGGGGCATGAGGCGAGTGGGAGGGATCAAAGCGTGAGTGGGAGTGCCACGTTCGGGAGGGATAGCAAGCACGTGACCCTTGACACATGCGACAGGGAGTTCGGCGTGGCTTTCACTTCCACCTCCATCAACTCGCTCGAAAACACCAGCTACGCTAAGCACTGCACCAAGACCACCACCATAGAAGAACATGATTCTGTTTCCCACAGTAAACCAATGGGGGAAGACGGGGATGAAGAGAAGAAAAAGAGAGCAAACGGCAAATCGTCGGTGTCCACTAAAAGGAGCAGAGCTGCGGCTATACACAACCAATCTGAAAGGAAAAGGAGGGATAAGATAAACCAAAGAATGAAGACATTGCAAAAGTTGGTCCCAAATTCCAGCAAGACTGATAAAGCTTCAATGTTGGATGAGGTAATAGAATATTTGAAGCAGTTGCAAGCACAAGTGCAGATGATGAATAGGATCAACATGTCATCTATGATGCTGCCATTGACCATGCAACAACAACTTCAAATGTCGATGATGTCTCCaatgggcatgggattagggatgggaatggggatggggatgggaatgggaatggATATGAACTCCATGAACCGTGCTAACATCCCTGGCATCCCTCCAGTCCTCCACCCTTCTGCCTTCATGCCCATGGCAGCCTCGTGGGATGCCGCTGTTGCTGCCGCTGCTGGTGGAGGCGACCGCCTTCAAGGGACTCCGGCTTCCGTGATGCCTGACCCTTTGTCCACAATTTTTGGATGCCAATCGCAGCCCATGACCATGGATGCCTACAGTAGACTTGCTGCAATGTATCAGCAGCTGCACCAACCTCCTACTTCTGGTTCCAAGAACTGA 1542 0.5169 MTFSVCGKRIVRGAVDIEKGAVGLRQDAEGRRELRRDDGNVVLDAAVPVILCVPSWDVEDNPPPSRVSLRSNSNSTAPDVPMLDYEVAELTWENGQLSMHGLGLPRVPVKPPTAATNKYTWEKPRGSGTLESIVNQATSFSHQEKPRPLNGDSGGGGGVYGNFMVPWFDPHAAATTTTTTTNTMTMDALVPCSNREQGKKKGMESGPGTCMVGCSTRVGSCCGGKGAKGHEASGRDQSVSGSATFGRDSKHVTLDTCDREFGVAFTSTSINSLENTSYAKHCTKTTTIEEHDSVSHSKPMGEDGDEEKKKRANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMNRINMSSMMLPLTMQQQLQMSMMSPMGMGLGMGMGMGMGMGMDMNSMNRANIPGIPPVLHPSAFMPMAASWDAAVAAAAGGGDRLQGTPASVMPDPLSTIFGCQSQPMTMDAYSRLAAMYQQLHQPPTSGSKN 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01402 513 MobiDBLite consensus disorder prediction 287 314 - -
Gma11g01402 513 CDD bHLH_AtPIF_like 324 385 - -
Gma11g01402 513 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 322 385 IPR036638 GO:0046983
Gma11g01402 513 PANTHER TRANSCRIPTION FACTOR UNE10 52 513 - -
Gma11g01402 513 MobiDBLite consensus disorder prediction 327 342 - -
Gma11g01402 513 MobiDBLite consensus disorder prediction 225 248 - -
Gma11g01402 513 Coils Coil 330 350 - -
Gma11g01402 513 Gene3D - 319 385 IPR036638 GO:0046983
Gma11g01402 513 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 324 373 IPR011598 GO:0046983
Gma11g01402 513 SMART finulus 330 379 IPR011598 GO:0046983
Gma11g01402 513 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 52 513 IPR031066 -
Gma11g01402 513 Pfam Helix-loop-helix DNA-binding domain 329 374 IPR011598 GO:0046983
Gma11g01402 513 MobiDBLite consensus disorder prediction 287 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01402 Gma-Chr11 13084662 13094066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01402 52 494 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 49.667 3.67e-96 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma11g01402 HLH 8.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01402 - - gmx:100787929 824.698