Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01399 ATGAATACCAAATTATACTTGGAAGCTTTAGAGATTGAAGAGGGCTCTCCTAGGAATCAAGGGTCTGAAACCCTAAGTTCAAGGGCCAACACTTATGATTCGAAGATTAAAAATGTTCCAAAACTGACAAGAAGAAAAAGCACGAGAATCAAGGAGGACCTCATTCCATCCCTAAATTCTCTAGTTCTTCATGCATCTCTTGACACTGAGTTTGGCTACTTCAAATCTTCTTGGAAAAACTTCACCCTCGTGGAGATTCAGGCTGCAACTGATGACTTTAGCCATGGAGGCTATGCAGAGGTTTACATGGGCAAATTGGAGGATGGAAACTTTGTTTCCATTAAACGGTTGACAAGAGGGTGCCGAGAAGAAATGATTGCAGATTTCTTGTCTGAGCTTGGCATTATAGTGCACGTGGACCACCCCAACATAGCTAGATTGATTGGATATGGTGTTGAAGGAGAAATGTTTCTTGTTCTTCATTTGTCTCCACATGGACCTAGAGAGAAACTGAATTGGAGTATCAGATATAAGATTGCTATGGGGATTGCTAAGGGCCTTCACTATATCTGCATGAGGGGTGTCAAAGAAGGATCATTCACAAAGACATAA 612 0.4134 MNTKLYLEALEIEEGSPRNQGSETLSSRANTYDSKIKNVPKLTRRKSTRIKEDLIPSLNSLVLHASLDTEFGYFKSSWKNFTLVEIQAATDDFSHGGYAEVYMGKLEDGNFVSIKRLTRGCREEMIADFLSELGIIVHVDHPNIARLIGYGVEGEMFLVLHLSPHGPREKLNWSIRYKIAMGIAKGLHYICMRGVKEGSFTKT 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01399 203 PANTHER OS08G0249100 PROTEIN 12 191 - -
Gma11g01399 203 SUPERFAMILY Protein kinase-like (PK-like) 78 193 IPR011009 -
Gma11g01399 203 Pfam Protein tyrosine and serine/threonine kinase 93 190 IPR001245 GO:0004672|GO:0006468
Gma11g01399 203 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 12 191 - -
Gma11g01399 203 Gene3D Transferase(Phosphotransferase) domain 1 72 191 - -
Gma11g01399 203 ProSiteProfiles Protein kinase domain profile. 87 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01399 Gma-Chr11 13075553 13076695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01399 65 190 Receptor kinase-like Gene Family AT1G53420 31.944 1.09e-18 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma11g01399 PK_Tyr_Ser-Thr 1.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01399 - - gmx:102670300 287.345