Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01367 ATGGATGATGGAAATGCTGAGCTTTCTGATAAGCTTTCAGATAATAATGTTCTATTTTTGAATCCAGAGTCATGTAGCAGTTTTCAGGCTTCAAGTAGCAGCAGAACATGCACACACACTCACACTTGCAATCCACCTGGCCCTGATGCTGCTCATACACACACATGCTATCACACACACACCCAAGTTTTTGCACCAGAAGATGATGGCAGGAAGCACTCAAACTCCAAGCAAAAAAGGCCTTCTGGAAACCGAGAAGCGGTTAGGAAGTATAGGGAGAAGAAGAAGGCACACACAGCATACTTGGAGGAGGAAGTTAAGAAATTGCATATGGTGAATCAACAACTAGCGAGGAAGCTACAAGGGCAGGCACTTCTTGAAGCAGAATTAGCAAGGTTGAGGAGCATTTTGGCACGACTTAAGGGGAAAATAGACAGTGAATTGGGTGCTTGGCCCTTTCAAAAACAATATTGTAACACTTCTTACATTTTCAAAGAAGGGGATGCTGGTCTTGAGTGTCAGAAGAACAATTTGCCATGCTTCCATCCACATGTAGGATCATCATCCCAGGTCAACATTTGTGCATGTGGAAAATCCATGATTCCATTGGATGGAAACTGCCAACCTGAAATGGTAGATTGCCAAGTAGATGCAAATAACATGACCAGTACTGAAGGACAAACTGTGGATAACATCATGTCATCTGCATCTCAAGACGGATAG 723 0.4315 MDDGNAELSDKLSDNNVLFLNPESCSSFQASSSSRTCTHTHTCNPPGPDAAHTHTCYHTHTQVFAPEDDGRKHSNSKQKRPSGNREAVRKYREKKKAHTAYLEEEVKKLHMVNQQLARKLQGQALLEAELARLRSILARLKGKIDSELGAWPFQKQYCNTSYIFKEGDAGLECQKNNLPCFHPHVGSSSQVNICACGKSMIPLDGNCQPEMVDCQVDANNMTSTEGQTVDNIMSSASQDG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01367 240 SUPERFAMILY Leucine zipper domain 77 121 IPR046347 GO:0003700|GO:0006355
Gma11g01367 240 Pfam Basic region leucine zipper 74 129 IPR004827 GO:0003700|GO:0006355
Gma11g01367 240 MobiDBLite consensus disorder prediction 64 90 - -
Gma11g01367 240 SMART brlzneu 72 139 IPR004827 GO:0003700|GO:0006355
Gma11g01367 240 MobiDBLite consensus disorder prediction 63 95 - -
Gma11g01367 240 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 74 140 IPR004827 GO:0003700|GO:0006355
Gma11g01367 240 CDD bZIP 77 131 - -
Gma11g01367 240 PANTHER BASIC LEUCINE ZIPPER 23 1 215 - -
Gma11g01367 240 Gene3D - 70 146 - -
Gma11g01367 240 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 215 - -
Gma11g01367 240 Coils Coil 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01367 Gma-Chr11 11914528 11917029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01367 1 181 bZIP Transcription Factor Family AT2G16770 48.148 3.72e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma11g01367 bZIP_2 3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01367 K25785 - gmx:100527780 460.685