Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01336 ATGGTTCGGTTCATAGAAAACTTGCCGCCAATGGATCTGATGCGCTCCGAGGCGATGACCTTCGTCCAGCTCATCATCCCCGCCGAGTCTGCGCACCGCGCCATCACCTATTTAGGCGAACTCGGCCTCCTTCAATTCCGCGACTTAAATGCTGAAAAAAGCCCCTTCCAGAGAACATTTGTTAACCAGGTAAAACGATGTGCAGAAATGTCAAGAAAGCTACGATTCTTCAAGGATCAAATCAATAAAGCTGGTCTAATGTCTTCTCCTTCGGTCTTGCAATCAGATATTTATCTGGAGGATTTAGAGATACAACTTGCTGAGCATGAACATGAGCTAATTGAAATGAACTCTAACAGTGAGAAACTTCAGCAATCATATAATGAACTCCTGGAGTTCAAGATTGTATTACAAAAGGCATGTCGTTTTCTTGTTTCAAGTCGTGGCAATGCTTGTTCAGAAGAGACAGAACTGGAGGAGAATGTTTTCTCAAATGGAGATTATATTGAGACACCATTTTTGTTTGAACAGGAAATGAGGCCTGCACCATCAAATCAATCTGGTTTAAGATTTATCAGTGGGATGATTTGTAAATCCAAAGTTCTTAGGTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAACATGCTTTTCAATCATGCACCTGCTGATGAACAAATCATGGATCCTATTTCAACTGAGATGGTTGAGAAAATTGTGTTTGTTGTGTTTTTCTCTGGGGAGCAAGCAAGAACAAAGATCCTGAAAATTTGTGATGCATTTGGTGCAAATTGTTACCCTGTTCCTGAAGATACAAATAAACAGAGGCAAATAACTTCAGAGGTTTCATCCCGTCTTGCTGACTTAGAGGCAACTTTGGATGCTGGGATTAGGCTTCGGAATAAGGCTCTAGCTTCTGTAGGAGGCCATTTAACAAAATGGATGGACATGGTAAGAAGAGAGAAGGCTGTGTACGATACACTGAACATGTTAAATTTTGATGTCACCAAAAAATGCCTTGTTGGAGAGGGCTGGTGCCCTATATTTGCAAAAACACAGATTCAGGAGGCACTGGAACGTGCAACTTTTGACAGCAGTTCTCAAGTTGGCATAATCTTTCATTCAATGGATGCACTGGAATCACCACCTACATATTTTAGGACCAATAGTTTCACAAGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCTGCAGTTTATACAACTATTATATTCCCATTTCTTTTTGCGGTTATGTTTGGCGACTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCATTGGTTCTTATAGCACGTCAAAGCAAGCTCAGCACTCAGCGACTTGGAAGCTTTATGGAGATGCTCTTTGGTGGGCGTTATGTGCTACTTTTGATGTCACTATTTTCAATTTATTGTGGGTTAATCTACAATGAATTCTTCTCTGTTCCTTATCACATATTCGGTGCATCTGCTTATAAATGCCAAGATAGTTCATGCAGGGATGCGCATACTATTGGCTTAGTAAAATACAGAGAACCATATCCATTTGGTGTGGATCCCAGTTGGCGGGGAAGTCGTTCAGAGTTGCCTTTTCTAAACTCTCTCAAGATGAAGATGTCCATTCTGCTGGGTGTGGTCCACATGAACTTGGGAATTCTTTTAAGTTATTTCAATGCTCGTTTCTTTGGCAACTCTCTGGATATAAGGTACCAGTTTGTGCCACAGATTATTTTCCTTAACTGTCTATTTGGGTATCTTTCCCTTCTCATTGTTGTCAAGTGGTGTACTGGCTCTCAGGCAGACCTTTATCATGTAATGATTTACATGTTTTTAAGCCCTTTTGACAATCTTGGTGAGAATCAATTGTTCTGGGGCCAAAGACCACTTCAAGTTGTGTTATTGCTTTTGGCTGTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCATTTATACTAAAGAAACTTTATAATGAGAGATTTCAAGGACGCACTTATGGTGTGCTTAATACCTCTGAGGTTGATCTTGAGTTGGAACCAGATTCTGCTAGGCAATATCACGAGGAATTCAATTTCAGTGAGGTCTTTGTTCACCAAATGATTCACTCCATTGAGTTTGTTCTAGGTTCAGTTTCAAATACAGCCTCATATCTACGACTTTGGGCATTAAGCTTAGCTCACTCAGAACTTTCTACCGTTTTTTATGAGAAAGTCCTGCTACTTGCTTGGGGGTATGACAATCTTGTCATTCGGTTAGTGGGGCTTGCTGTTTTTGCCTTTGCAACTGCCTTCATACTATTAATGATGGAGACTCTCAGTGCTTTTCTTCACGCCTTGCGTCTTCACTGGGTAGAATTTCAGAATAAATTCTACAGCGGTGATGGCTACAAGTTCAAACCTTTTTCCTTTGTCTCCTTAACAGAGGAAGAAAATTGA 2457 0.4074 MVRFIENLPPMDLMRSEAMTFVQLIIPAESAHRAITYLGELGLLQFRDLNAEKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLMSSPSVLQSDIYLEDLEIQLAEHEHELIEMNSNSEKLQQSYNELLEFKIVLQKACRFLVSSRGNACSEETELEENVFSNGDYIETPFLFEQEMRPAPSNQSGLRFISGMICKSKVLRFERMLFRATRGNMLFNHAPADEQIMDPISTEMVEKIVFVVFFSGEQARTKILKICDAFGANCYPVPEDTNKQRQITSEVSSRLADLEATLDAGIRLRNKALASVGGHLTKWMDMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQIQEALERATFDSSSQVGIIFHSMDALESPPTYFRTNSFTSPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALVLIARQSKLSTQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPYHIFGASAYKCQDSSCRDAHTIGLVKYREPYPFGVDPSWRGSRSELPFLNSLKMKMSILLGVVHMNLGILLSYFNARFFGNSLDIRYQFVPQIIFLNCLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPFDNLGENQLFWGQRPLQVVLLLLAVIAVPWMLFPKPFILKKLYNERFQGRTYGVLNTSEVDLELEPDSARQYHEEFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYSGDGYKFKPFSFVSLTEEEN 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01336 818 PIRSF ATP6V0A1 9 818 IPR026028 GO:0000220|GO:0046961
Gma11g01336 818 Pfam V-type ATPase 116kDa subunit family 37 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gma11g01336 818 PANTHER VACUOLAR PROTON ATPASES 5 817 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gma11g01336 818 Coils Coil 99 126 - -
Gma11g01336 818 PANTHER VACUOLAR PROTON ATPASE A1 5 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01336 Gma-Chr11 11579777 11590550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01336 1 811 Primary Pumps ATPases(2) AT2G28520 79.632 0.0 1338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01336 K02154 - gmx:100786845 1632.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01336 11 11579777 11590550 Gma11g01336 11 11579777 11590550 ECH
Gma12g00648 12 5442909 5455228 Gma11g01336 11 11579777 11590550 GST
Gma13g02934 13 43902103 43917255 Gma11g01336 11 11579777 11590550 PCT
Gma15g00426 15 3625419 3636122 Gma11g01336 11 11579777 11590550 PCT
Gma11g01336 11 11579777 11590550 Gma13g02934 13 43902103 43917255 PCT
Gma11g01336 11 11579777 11590550 Gma15g00426 15 3625419 3636122 PCT