Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01325 ATGGAAAACAATGGTGCTGAATCTGAGAATCCGAAAGGGATTCCAATTCACGGAGGGAAGTACGTTCGCTACAACATCTTAGGCAGCCATTTCCAAGTCTATTCCAAGTACGCTCCCCCTCTCCAACCCGTTGGTCGCGGCGCATACGGCATCGTTTGCTGTGCGACGAATTCGGAGACGAAAGAAGGAGTGGCGATAAAGAAGATTGGGAATGCGTTTGACAACAGGATCGATGCCAAGAGAACGCTCAGGGAAATCAAGCTTCTCTGTCACATGGAACATGATAACATAATTAAAATAAAGGACATAATTCGGCCAGCGGAGAGGGAGAATTTCAACGATGTTTATATTGTGTACGAATTGATGGACACCGATCTGCATCAGATTATACAGTCTAATCAGTCTCTCACCGATGAGCATTGCCAGTACTTCTTATATCAACTCTTGCGAGGATTGAAGTACATCCACTCTGCAAATGTTTTGCACCGAGATCTAAAACCAAGCAATTTACTTCTCAACGCAAACTGTGATCTCAAGATATGTGACTTTGGGCTTGCCAGAACAACCTCTGAGACCGACTTTATGACAGAATATGTTGTCACTCGTTGGTACAGAGCCCCTGAATTGCTACTAAACTGTTCAGAATATACTGCAGCTATTGATATTTGGTCGGTTGGTTGCATTTTGATGGAGATAGTTAGAAGGGAGCCTTTATTTCCTGGTAAAGATTATGTCCAACAGTTGGCCCTTATAACTGAGTTACTAGGTTCACCAAATGACTCGGATCTTGGATTCCTCAGAAGTGATAATGCAAAGAAATATGTTAAGCAGCTCCCACATGTAGAAAAGCAATCCTTCGCAGAGCGGTTTCCTGAAATGTCCCCCTTAGCAATTGATCTTGCTGAGAAAATGCTGGTTTTTGATCCCTCCAAGCGCATAACTGTCGAGGAAGCCCTGAATCACCCCTATATGGCAAGTCTTCATGAGATCAACGAGGAGCCCACTTGCCCAACTCCTTTCATATTTTCTTTCGAACAGACAATTCTCAAAGAAGAAGATATAAAGGAGCTCATATGGAAGGAGTCTCTAAACTTCAGCCAGGATCATCAGATGTTGGAATAG 1122 0.434 MENNGAESENPKGIPIHGGKYVRYNILGSHFQVYSKYAPPLQPVGRGAYGIVCCATNSETKEGVAIKKIGNAFDNRIDAKRTLREIKLLCHMEHDNIIKIKDIIRPAERENFNDVYIVYELMDTDLHQIIQSNQSLTDEHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILMEIVRREPLFPGKDYVQQLALITELLGSPNDSDLGFLRSDNAKKYVKQLPHVEKQSFAERFPEMSPLAIDLAEKMLVFDPSKRITVEEALNHPYMASLHEINEEPTCPTPFIFSFEQTILKEEDIKELIWKESLNFSQDHQMLE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01325 373 ProSitePatterns Protein kinases ATP-binding region signature. 44 68 IPR017441 GO:0005524
Gma11g01325 373 SMART serkin_6 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01325 373 Gene3D Phosphorylase Kinase; domain 1 21 361 - -
Gma11g01325 373 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 16 369 - -
Gma11g01325 373 ProSitePatterns MAP kinase signature. 73 176 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gma11g01325 373 Pfam Protein kinase domain 42 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01325 373 SUPERFAMILY Protein kinase-like (PK-like) 41 330 IPR011009 -
Gma11g01325 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Gma11g01325 373 Gene3D Transferase(Phosphotransferase) domain 1 122 351 - -
Gma11g01325 373 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 369 - -
Gma11g01325 373 ProSiteProfiles Protein kinase domain profile. 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01325 Gma-Chr11 11443525 11446845 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01325 7 365 MAP Kinase Gene Family AT1G07880 79.387 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gma11g01325 Pkinase 3.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01325 K04371 - gmx:100786314 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01325 11 11443525 11446845 Gma11g01325 11 11443525 11446845 ECH
Gma12g00655 12 5578779 5582729 Gma11g01325 11 11443525 11446845 GST