Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01324 ATGAACAATAATGTTGGGAAAGGGGAAAAAGGTTTGGCAGAACAAAATCATATGTTTTTTAACAAAAAGAGTCTCAATAATGGAGTAGTTAATGAAGGGGTAGGCTCTGGATCATCAACTGAAGATGACACAAGATTTAATAAGGTGGCTGAAGATGGAAACAATGGGTTGAGGGGCCTGATTCAAATCCATGGGAGCTTGCAAATTTCACAACAGCCTCCTCAAGGGCCAGTCGTATGCTGGGAGAGATTTCTCCCTGTAAGATCAATAAAAGTTTTGCTGGTGGAAGATGATGATTCGACACGCCATGTTGTGCGTGCTCTGTTACGGAATTGTAGTTATGAAGTCACTGCTGTTTCCAATGGTCTTCAAGCGTGGAAAGTCCTGGAAGATCCAGAAAATGGCATTGATCTTGTCCTAACAGAGGTAGCTATGCCTATTTTGTCTGGAATAGGTCTTTTGTGCAAGATCATGAGCCACAAAACTCTGAAGAATATTCCTGTGATTATGATGTCATCTCATGATTCTATGGGTATAGTCTTTAAGTGTTTGTCAAAAGGCGCAGTTGATTTTTTAGTGAAACCAATTCGGAGGAATGAACTTAAAAACCTCTGGCAGCACGTTTGGAGAAGATGCCACAGTTCTAGTGGTAGTGGGAGTGAAAGTGCGACCCACACCAGAAAATTTGCAAAGTCAAGAAGTAATGATGCATGTGAAAACAATAGTGACAGCAGTGATGAGAATGACTATGGAAGCAGAGACTTGAGCGTTCGAGATGGAAGTGGCACTCAGAGTTCATGGACTAAATGTCTAGCTCAAGTTGGCAGTCCTCATCCGGTTTCACCTCATAAACAATTGGTTGATGCCCCTGATAGCACTTGTGCCCAAGTGATGCAAACAAAGACTGAAAAAGTTAGTAGTAGATGGGTGCATGCGACAGAAAAAGAGTGCCATGAACTTATTGATCCTCTTGATGATGTTGCAATGGGTAAGGACTTGGCCATGGGAATATCTTTGAATATGCGACTAGAGCATCCACTCAAGGAACTGTCCTGCAATCCAATGATGGGTAAAGGGGCAAATAAGATGTCTGATGTAGATGATATGCAGATCATTAAAAGACAGAGCAATGCCTGTGAAAAAGGACAACTGGAATACAATGGTGATAAAACCAGGACACGGGAAAATCAGGCTATGAATGTTATTGATGTTACTGATAGCAACAGTCCACTCGCTGAAAGCAGAGACTTGAACACTCCAAATGGGTTTTCTGGTTTTTCACAATCAAAAGCAAACTGTTGCCCCAAAGAGCATCCATCCCTTGAACTAACTTTGGAAAGGCTGGGAGAAGTAAGAGATGGTAAAAATTTCACAGGTGAAGAATGCAATGTCTTGAGACATTCAGATCAGTCAGCATTCTCAAATGTTAATCACCAAATCTTAATCTTTGGCCAATCCTTATGTTATGTTTTCTTTACTTTTTATCAGGCTCAAACTGGAAATGTAGGAAGCTGTTCCCCACTAGACAATAGCTCAGCTGCACCAAATACAGAGACAATGCACAACTTTGCATCTCATTCAAATGGCACTCCTCCAAATCAACAATCTAATGGGAGCAACAACATCAATGACATGGCCTCCATTAATACATATCTTGGCACCAAACTTGATACTTTTGACAAGAAGCCAGAGTCTGGAAGAGGGATTGGCTCGTTTAATTCTCGTGAACTCCAAACTCTGCAGAAGAATAACATCTGTTCATCTCAGAAGAAAACTACTGCCCGGGAAGAATATACAGAAATCATTAAAGAATCAGTAGGAGGCTCTGAACATGGATTCCAAGTCGAGCACACTTACTATCAGCTTCACCATTATAATCACATTGCCCATAAAGCTGCAGTAGATCTCCAATCAGATCATGATCTCTTACTGAAAAGCTCAACTCAGCAATGTGTATCATCAAATGCATTTGGAGGGCCAGCAGAAAGTAATGCTGCAAACTATGGTGTGGATGGAAATGCAGCGGAGAGTGATCATGGGAGCAATAATGGACAGGATGGAAGCAACACCTTGACAATCAGAATGATAAATATGGAAAATGGCAATGTGGCTGCTGGGAGCATTGGAATTGGTGGCATTGATAGGAAAAGCTTTGGGAATGGGGCAGATGAAGGACGGCTTGCATTGAGAGAGGCTGCCTTGACCAAATTTCGTCTAAAGAGAAAAGAAAGATGCTTTGAGAAGAAGGTTCGATATCACAGCAGGAAAAAACTAGCAGAACAGCGGCCACGTATTAGGGGACAATTTGTCAGACGAATAGTGTCTGAAGGCAAAGAAGAAAAAGATAAACAAAGTGACAACCTGGTTCCTGGGGATAATTCTATCGACATTCCTCAATAG 2400 0.4158 MNNNVGKGEKGLAEQNHMFFNKKSLNNGVVNEGVGSGSSTEDDTRFNKVAEDGNNGLRGLIQIHGSLQISQQPPQGPVVCWERFLPVRSIKVLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVLEDPENGIDLVLTEVAMPILSGIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHVWRRCHSSSGSGSESATHTRKFAKSRSNDACENNSDSSDENDYGSRDLSVRDGSGTQSSWTKCLAQVGSPHPVSPHKQLVDAPDSTCAQVMQTKTEKVSSRWVHATEKECHELIDPLDDVAMGKDLAMGISLNMRLEHPLKELSCNPMMGKGANKMSDVDDMQIIKRQSNACEKGQLEYNGDKTRTRENQAMNVIDVTDSNSPLAESRDLNTPNGFSGFSQSKANCCPKEHPSLELTLERLGEVRDGKNFTGEECNVLRHSDQSAFSNVNHQILIFGQSLCYVFFTFYQAQTGNVGSCSPLDNSSAAPNTETMHNFASHSNGTPPNQQSNGSNNINDMASINTYLGTKLDTFDKKPESGRGIGSFNSRELQTLQKNNICSSQKKTTAREEYTEIIKESVGGSEHGFQVEHTYYQLHHYNHIAHKAAVDLQSDHDLLLKSSTQQCVSSNAFGGPAESNAANYGVDGNAAESDHGSNNGQDGSNTLTIRMINMENGNVAAGSIGIGGIDRKSFGNGADEGRLALREAALTKFRLKRKERCFEKKVRYHSRKKLAEQRPRIRGQFVRRIVSEGKEEKDKQSDNLVPGDNSIDIPQ 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01324 799 MobiDBLite consensus disorder prediction 213 261 - -
Gma11g01324 799 Pfam CCT motif 730 771 IPR010402 GO:0005515
Gma11g01324 799 CDD psREC_PRR 92 195 - -
Gma11g01324 799 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 32 765 - -
Gma11g01324 799 MobiDBLite consensus disorder prediction 668 689 - -
Gma11g01324 799 MobiDBLite consensus disorder prediction 510 544 - -
Gma11g01324 799 ProSiteProfiles Response regulatory domain profile. 91 209 IPR001789 GO:0000160
Gma11g01324 799 Gene3D - 89 278 - -
Gma11g01324 799 MobiDBLite consensus disorder prediction 775 799 - -
Gma11g01324 799 ProSiteProfiles CCT domain profile. 730 772 IPR010402 GO:0005515
Gma11g01324 799 SMART REC_2 90 205 IPR001789 GO:0000160
Gma11g01324 799 SUPERFAMILY CheY-like 88 214 IPR011006 -
Gma11g01324 799 Pfam Response regulator receiver domain 92 203 IPR001789 GO:0000160
Gma11g01324 799 PANTHER TWO-COMPONENT RESPONSE REGULATOR 32 765 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01324 Gma-Chr11 11412784 11433467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01324 18 477 Response Regulator Gene Family AT5G60100 44.937 5.43e-91 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Gma11g01324 Response_reg 7.3e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01324 K12129 - gmx:100785796 1326.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01324 11 11412784 11433467 Gma11g01324 11 11412784 11433467 ECH
Gma11g01324 11 11412784 11433467 Gma12g00656 12 5589242 5603635 ECH
Gma03g00743 03 26170422 26174354 Gma11g01324 11 11412784 11433467 ECH