Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01323 ATGGGTTGGTTTTGTTGCCAAGGGAAATCAAGCAAAAAATCGGTTGCCGAAGAAGACTACCGCGACAGCCTCGACCAGAAACCCACCAATTTCACCGCGACAGATAGCGTAAAAGTTGATTTCAAAGTGAATGGGAATAAGGAAGATGGTTCTAAAGGTGATCAACTTGCTCTGGACGTGAAGAGTTTAAATTTGAAAGAGGAGGTTTCTCAGGATAGAAAAGATAATGGCAATCGGGCACAGACATTCAGTTTTAATGAACTTGAAGCTGCGACCGGAAATTTTAGGGTGGATTGCTTTTTGGGTGAAGGAGGCTTTGGCAAGGTTTACAAGGGACACTTGGAGAGAATTAACCAGgttgtagctataaagcaaCTTGACCCTAACGGACTTCAAGGGATTCGTGAATTTGTTGTTGAAGTGTTGACATTGAGTTTGGCAGACCACACTAATCTTGTGAAGTTGATTGGATTTTGTGCTGAGGGAGAGCAGAGGCTATTAGTTTATGAGTACATGCCATTAGGATCTTTGGAGGACCATTTGCTTGGTAAATTCTATCACCTCAAATTTTCATATATTGTCAGCAGCATTCTTTATCAATGGCTCGTCTCATTTCCTCTTCCCATTGTCCTAGATATTCGACCAGGTAGaaaaccacttgattggaacacaagaatgaaaatagcagctggcgcagctaggggtttggagtatctgcatgataaaatgaagcctcctgtaatatatcgtgacttgaaatgttctaacattttgttaggagagggatatcatcctaaattgtccgattttggcttggcaaaagtaggcccaagtggtgataagacccatgtttcaactagggttatgggcacatatgggtattgtgccccagattatgcaatgacaggtcagttgacattcaagtcagatatttacagcttcggggttgttcttttggagcttattacaggccggaaagccattgaccatacaaaacctgccaaagaacaaaatctaattgcatggGCAAGACCCTTGTTCAGGGACAGGAGGAAATTTTCACGAATGGTTGACCCATTACTTGAAGGTCAATATCCCGTGAGAGGCCTATACCAAGCTCTTGCCATTGCTGCTATGTGTGTTCAAGAGCAGCCTAATATGCGGCCTGTAATAGTTGATGTGGTTACAGCTCTAAATTACCTAGCTTCTCAGAAGTATGATCCACAACTTCATCCTGCACAAACCTCTAGAAGAAGTCCACCTTCTCAGATAATGAAAAGGGATGATGATGCTCATAGACATATTTTAAGCATGGAGCATGAGACAGACAGATCTTAA 1338 0.2997 MGWFCCQGKSSKKSVAEEDYRDSLDQKPTNFTATDSVKVDFKVNGNKEDGSKGDQLALDVKSLNLKEEVSQDRKDNGNRAQTFSFNELEAATGNFRVDCFLGEGGFGKVYKGHLERINQVVAIKQLDPNGLQGIREFVVEVLTLSLADHTNLVKLIGFCAEGEQRLLVYEYMPLGSLEDHLLGKFYHLKFSYIVSSILYQWLVSFPLPIVLDIRPGRKPLDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHTKPAKEQNLIAWARPLFRDRRKFSRMVDPLLEGQYPVRGLYQALAIAAMCVQEQPNMRPVIVDVVTALNYLASQKYDPQLHPAQTSRRSPPSQIMKRDDDAHRHILSMEHETDRS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01323 445 ProSiteProfiles Protein kinase domain profile. 95 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01323 445 SMART serkin_6 95 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01323 445 CDD STKc_IRAK 101 399 - -
Gma11g01323 445 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 210 430 - -
Gma11g01323 445 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 1 186 - -
Gma11g01323 445 Pfam Protein tyrosine and serine/threonine kinase 100 336 IPR001245 GO:0004672|GO:0006468
Gma11g01323 445 MobiDBLite consensus disorder prediction 409 445 - -
Gma11g01323 445 MobiDBLite consensus disorder prediction 422 445 - -
Gma11g01323 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Gma11g01323 445 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524
Gma11g01323 445 Gene3D Phosphorylase Kinase; domain 1 65 171 - -
Gma11g01323 445 Gene3D Transferase(Phosphotransferase) domain 1 207 418 - -
Gma11g01323 445 SUPERFAMILY Protein kinase-like (PK-like) 81 419 IPR011009 -
Gma11g01323 445 PANTHER OS07G0668900 PROTEIN 1 186 - -
Gma11g01323 445 PANTHER OS07G0668900 PROTEIN 210 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01323 Gma-Chr11 11397326 11401569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01323 61 403 Glycoside Hydrolase AT3G07070 57.681 1.37e-140 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gma11g01323 PK_Tyr_Ser-Thr 4.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01323 - - gmx:100811821 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01323 11 11397326 11401569 Gma11g01323 11 11397326 11401569 ECH
Gma11g01323 11 11397326 11401569 Gma12g00657 12 5615481 5619900 ECH
Gma12g00657 12 5615481 5619900 Gma11g01323 11 11397326 11401569 GST
Gma13g02945 13 44015822 44019160 Gma11g01323 11 11397326 11401569 PCT
Gma15g00418 15 3520669 3524329 Gma11g01323 11 11397326 11401569 PCT
Gma11g01323 11 11397326 11401569 Gma13g02945 13 44015822 44019160 PCT
Gma11g01323 11 11397326 11401569 Gma15g00418 15 3520669 3524329 PCT