Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01319 ATGTACACACACCGCAACGCCTCGCTCTCACGCGCCGCCGCCGACTCCCTCGGCCATTTCCTCTCTCCACCGGACGCATCCACGGCGTCGCCAATGCAGTACTCCGCCGCCGCTCACCACCAACTCGGGCTGGGCGAGTTTGACAACTCGGTTCACGAACTCAATTACTCGGAGATGAGTTCGAGTAACACGTACAACAGCTGCAGCAGCGGGTGCACGAGCTACATGGGGTCGCCGAGTTCGCTGGCGAGTAATTACGAGAGTCGGCGAGTAGTGCAGAGGAGCGTTAGCAGCCACTCGCTGCAGAAGAATGGTAGGGCCCACCACCAACCCTTTTCTGAGTTCTCTCCTCTTTTCGTTGAGTTCATTGACTCGGAAAACGGTCCCGTACGGAGAGCTTGCAGTACCGGTGACCTTCAGAGATTCAATGGAATGCAACATTTTCAGCATTCTGATAGCTCATTGTCAAGTGAAAGTAGTTTGATCATTGAAGAAATGAGCAGAACCAGTCCTTATAGCCCAGAGGAGAAGAAGGTGAGGATTGAGAGATATAGGAACAAGAGAAACCAGAGGAACTTCGGCAAGAAAATTAAGTATGCTTGCAGAAAGACTTTGGCAGATAGCAGGCCACGTATCAGAGGGCGATTTGCAAGGAATGATGAAACTGCTAAGAACCCTCCAGCTCAGTGGAGTCACATGGGAAATGGAGAGGAAGAGGATGAAGAGGAAGAGAATTGGGCTGATTTCTTTGATTCCTTAGTTCCTGCAAATATTGCTCAGGAGCCTCAAGGCAGTAGTTCCTCCTTTGGTGTGTTCTATTAA 822 0.5085 MYTHRNASLSRAAADSLGHFLSPPDASTASPMQYSAAAHHQLGLGEFDNSVHELNYSEMSSSNTYNSCSSGCTSYMGSPSSLASNYESRRVVQRSVSSHSLQKNGRAHHQPFSEFSPLFVEFIDSENGPVRRACSTGDLQRFNGMQHFQHSDSSLSSESSLIIEEMSRTSPYSPEEKKVRIERYRNKRNQRNFGKKIKYACRKTLADSRPRIRGRFARNDETAKNPPAQWSHMGNGEEEDEEEENWADFFDSLVPANIAQEPQGSSSSFGVFY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01319 273 MobiDBLite consensus disorder prediction 215 246 - -
Gma11g01319 273 Pfam CCT motif 179 219 IPR010402 GO:0005515
Gma11g01319 273 ProSiteProfiles CCT domain profile. 177 219 IPR010402 GO:0005515
Gma11g01319 273 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 30 273 IPR045281 GO:0009909
Gma11g01319 273 PANTHER CCT MOTIF PROTEIN 30 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01319 Gma-Chr11 11318930 11321613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01319 168 222 C2C2-CO-like Transcription Factor Family AT5G24930 49.091 3.70e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma11g01319 CCT 1.7e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01319 - - gmx:102667349 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01319 11 11318930 11321613 Gma11g01319 11 11318930 11321613 ECH
Gma12g00661 12 5683570 5686297 Gma11g01319 11 11318930 11321613 GST
Gma13g02952 13 44096467 44098782 Gma11g01319 11 11318930 11321613 PCT
Gma11g01319 11 11318930 11321613 Gma13g02952 13 44096467 44098782 PCT