Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01311 atgccgagaaaaggaatgagaagcattttcttcacatcaacgcccacggcatcactaccacctccttcccgtcaacgcactttctcagactcgttaatggacgaaaacatagaaaccgcagagaagctcataacgaaatgggacgattccaaagtcacaacaacaacgcaacttttcagcggcacgcgccaggaagccaaacagtacctaaacgccgtgaagggactacaatccgctatgcagtacctcgtcgcacaggattccacctccagcaccctcgtgcgcgcgcagttcctcatgcaactcgccatgaagacgctccagaaagagttctaccagattctatcctccaacagagaacacctggatcccgaaactgtctccacgcgctcctccgttgaccaccgcagcagcgtctccgattacgacgacgaaatctcaatcaccgaggacgagttccgcgtttccgagaccgagcgcgtttccatgctcgccatggaggatttgaaagccatagctgagtgcatgatttcctccggctacggcaaggagtgcgtcaaggtttacatcgtcatgagaaaatcgatcgtcgacgaagcgctgtatcatctcggagttgaaaaattgaacctctctcaggtccagaagctggattgggaggttctcgagttgaagatcaagagctggttaaaagccgttaaagtcgccgtcggaacactgttcaacggcgagaggatcctctgcgaccacgttttcgctgcggattcggggaaaagaatcgcggaatcatgtttcgcggaaatcaccaaagacggcgccgtatctcttttgggatttccggaaatggtggcgaagtgcaagaaatcgccggaaaaaatgttcaggattctggatttgtacgaagcgatctccgactactggcctcagatcgaattcatattctccttcgagtcaacggttaacattcgcacacagaccgttacgtcgatggtgaaactcggcgacgctgttagaacgatgctaacggactttgaaactgcgattcagaaagagtcatcgaagaaaccggtccctggcggtggtgttcaccctctcacgcgctacgtgatgaactacctcacgttcctcgccgattacagcggcgtgttggtcgatataattgccgatttgccgcaatctccgttgccggagtcttactaccgcagcccgatGCGCGAGGAAAACCCGCCGGCTTCGGAGCTATCGGAGCGAATCGCGTGGATCATACTCGTCGTGCTCTGCAAGCTCGACGGCAAAGCGGAACTCTACAAAGACGTGGCGCACTCGTACCTGTTTCTCGCGAATAACATGCAATACGTCGTCGTAAaggtgcgcaaatcgaacctagggtttcttctcggcgaagagtggttggcgaagcatgaattgaaagttagagagtacacgtctaagtacgagagcgtcgggtggaGCGCTGTCTTCTCGTCGTTGCCGGAAAATCCCGCGGCGGAGTTGACGGCGGAGCAGGCAAGGGCCTGTTTCGTGAGGTTCGACGCTGCGTTTCATGAAGCGTGTAAAAAACAGGCCTCGTGGGTCGTATCCGACCCGAAATTTCGTGATGAAATCAAAGACTCGATAGCTTCTAAGCTGATGCAAAAGTACAGCGTGTTCTTCGAGAAGAATCGGGTCGGGTCGAAATCCGTTAGGGACTTTCTACCCGATGATATTGGGAAATACCTTTCTAACATTTTGTGTGACGGAGATTCGGTTAGTGTCTCATCACACTCTTCGTCAACCACGTCGGCTTCCCATCGCTCTAATCGACGGTGA 1830 0.1475 MPRKGMRSIFFTSTPTASLPPPSRQRTFSDSLMDENIETAEKLITKWDDSKVTTTTQLFSGTRQEAKQYLNAVKGLQSAMQYLVAQDSTSSTLVRAQFLMQLAMKTLQKEFYQILSSNREHLDPETVSTRSSVDHRSSVSDYDDEISITEDEFRVSETERVSMLAMEDLKAIAECMISSGYGKECVKVYIVMRKSIVDEALYHLGVEKLNLSQVQKLDWEVLELKIKSWLKAVKVAVGTLFNGERILCDHVFAADSGKRIAESCFAEITKDGAVSLLGFPEMVAKCKKSPEKMFRILDLYEAISDYWPQIEFIFSFESTVNIRTQTVTSMVKLGDAVRTMLTDFETAIQKESSKKPVPGGGVHPLTRYVMNYLTFLADYSGVLVDIIADLPQSPLPESYYRSPMREENPPASELSERIAWIILVVLCKLDGKAELYKDVAHSYLFLANNMQYVVVKVRKSNLGFLLGEEWLAKHELKVREYTSKYESVGWSAVFSSLPENPAAELTAEQARACFVRFDAAFHEACKKQASWVVSDPKFRDEIKDSIASKLMQKYSVFFEKNRVGSKSVRDFLPDDIGKYLSNILCDGDSVSVSSHSSSTTSASHRSNRR 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01311 609 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 6 590 - -
Gma11g01311 609 Pfam Exo70 exocyst complex subunit 227 581 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma11g01311 609 MobiDBLite consensus disorder prediction 9 28 - -
Gma11g01311 609 Gene3D Exocyst complex component Exo70 43 589 - -
Gma11g01311 609 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 590 IPR004140 GO:0000145|GO:0006887
Gma11g01311 609 MobiDBLite consensus disorder prediction 1 28 - -
Gma11g01311 609 SUPERFAMILY Cullin repeat-like 37 581 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01311 Gma-Chr11 11206055 11208228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01311 10 583 EXO70 exocyst subunit family AT5G59730 48.922 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01311 K07195 - gmx:100808078 1141.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01311 11 11206055 11208228 Gma11g01311 11 11206055 11208228 ECH
Gma12g00668 12 5808418 5809947 Gma11g01311 11 11206055 11208228 GST