Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01290 ATGTCTTTGCAAAACAAGGGATTTTGGATGGTAAAGGGTTCTGGACACATTAATGACAGAGATACAGTATTTGATAATCCCACCAAAATTGAACCAAAACGACCTCATCAATGGTTTGTTGATGCTGCTGAAGTAGATTTTTTTCCAAACAAGAAACAAGCCGTAGAAGATGCAGATGAAAAATCTAGTCCTGGATTTTCAAATGTAAATATTCCTCCCTGGGAGAACAATCCCAATTTTCATTCAGTCCCAAACCAATTTATTGGCCGGTTATTTGGGTCTGAAACCAGGCCTGTCAATTTCACTGAAAAGAATACTTATGTTTTGGCTGATGATTCTAATGTGAGATCAAAGATGGTCACCAATCAATATGGAGATGAAGCATCTTTTGGTTTGTCTATATCTCATTCTATTGAAGATTCTGAAGCATGTGTAAATTTTGGTGGAATAAAAAAAGTCAAAGTAAATCAGGTTAAGGAAGTTGATGTACAGGCTCTGGAGGGACATAATTTTGGTAGGCAGAGTAATGGTGATCTACATCAGGCCTATAACAGGGAAGTTGAGACAAGGTCTGCATCAATAGGGCAAGCCTTTGACAAGGATCGTGATGCCACTTTAATGGGACTCACCTACAGCAGAGGGGATGCACATGTCAGATCATTTGGTGCCTCCTTTGTCAAAGGTGATGACTCAATCGTATCGATTAGTGAATCCTATAATAAAGAGGACACAAATATAATTTCTTTTGGTGGGTTCCCAGATGAAAGGGATATTATCTCTGTGGGTAGGCCTGCTGCAGAGTATGATCAATTATATAATCAATCTTCAGTTCATGTGTCAACAACAGCCCACGAGAAAGAGTTGGATGTGTCAAGTTCTGATGCAGTTGCAAGTACACTTCAGGTAGCAAAAGTTAAGTCTGAAACTGTATCCAAGAATAAACAAGAGCTCAAAACAGCAAAGAAAGAAGCTCCAAACAGCTTCCCTTCTAATGTCAGAAGCTTGATATCTACTGGTATTCTTGATGGAGTTCCTGTGAAGTATGTCTCAGTGTCACGTGAGGAACTTCGAGGAATTATAAAAGGCTCTGGTTATCTTTGTGGGTGTCAGTCATGTAACTATACAAAGGTTCTGAATGCTTACGAGTTTGAGAGACATGCTGGCTGCAAAACAAAACATCCAAACAATCACATTTATTTTGAGAATGGGAAGACTATTTATCAAATAGTACAGGAATTGAGGAGTACCCCAGAAAGTTTGTTGTTTGATACAATTCAAACAGTTTTTGGTGCACCAATTAATCAGAAAGCATTTCGCAACTGGAAAGAATCATTTCAAGCAGCAACACGGGAGCTTCAACGCATTTATGGAAAGGAAGAACTTAACCTATAA 1392 0.3872 MSLQNKGFWMVKGSGHINDRDTVFDNPTKIEPKRPHQWFVDAAEVDFFPNKKQAVEDADEKSSPGFSNVNIPPWENNPNFHSVPNQFIGRLFGSETRPVNFTEKNTYVLADDSNVRSKMVTNQYGDEASFGLSISHSIEDSEACVNFGGIKKVKVNQVKEVDVQALEGHNFGRQSNGDLHQAYNREVETRSASIGQAFDKDRDATLMGLTYSRGDAHVRSFGASFVKGDDSIVSISESYNKEDTNIISFGGFPDERDIISVGRPAAEYDQLYNQSSVHVSTTAHEKELDVSSSDAVASTLQVAKVKSETVSKNKQELKTAKKEAPNSFPSNVRSLISTGILDGVPVKYVSVSREELRGIIKGSGYLCGCQSCNYTKVLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTIQTVFGAPINQKAFRNWKESFQAATRELQRIYGKEELNL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01290 463 PANTHER DNA-BINDING PROTEIN 1 463 - -
Gma11g01290 463 PANTHER AUTOIMMUNE REGULATOR 1 463 - -
Gma11g01290 463 Pfam Tify domain binding domain 358 413 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01290 Gma-Chr11 11007512 11011048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01290 310 446 PHD Transcription Factor Family AT3G53680 52.899 1.44e-41 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01290 - - gmx:100802229 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01290 11 11007512 11011048 Gma11g01290 11 11007512 11011048 ECH
Gma11g01290 11 11007512 11011048 Gma12g00584 12 4898946 4901899 ECH