Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01273 ATGGAGAGTGGGAATAATACTAATCATGAGTTGGAGATGGAAATGGAGAGTGGAGGGAGTAATGGTAATGAGGGGGTTGCAGCGAGTTCGCGGTGGAACCCTACAAAAGAGCAAATAAGCATGCTAGAGAATTTGTATAAGCAGGGAATAAAGACTCCGAGTGCTGAGGAGATACAGCAGATAACTGCTAGGCTTAGGGCGTATGGTCACATCGAAGGAAAGAATGTCTTCTACTGGTTTCAGAACCACAAAGCCAGACAGAGACAGAAGCAGAAGCAAGAAACCTTTGCTTACTTCAATCGCTTTCTTCATACGCCTCAGCCTTTTTTTTCTCCGCCAATTTGCCCAAATGGTATTCGGTTTTGGTTTTCAGCCATGTGTGCCCCATATTACATACCTCAGGGACAGGGTGAAATTGGGTTTTATCCCCCACACCAAAAGGTATTTGTACCCGTAGGTTTTAGGAGGAGCCCCTCTGAGAAAGTTGTGCCCACAGGCATGATAAGTAGTAATGGCCCTCTGGTATACGAAGGCATGCATCAAATGCAACAGAGAATCTCGGATTGCAGCAACTCTCACTTCAGTCACCAAGAAACGTTGGATCTTTTCCCTCTGCACCCAACCGGCATTTTGGAAGGGAAAACAACAACAACAACAGACCAGGTGTCTTCTCTGGCTTCAGTAGTTTCTGCTGATAGTTCCACTGATACAACTTCTGCTGATGACATCAATGAAGATGATCATGCTTCCCCACTGAACCAACCCTTCTTTAATTTTTTTACTACTTCTGGACAAGGTTCTTATTAA 807 0.4461 MESGNNTNHELEMEMESGGSNGNEGVAASSRWNPTKEQISMLENLYKQGIKTPSAEEIQQITARLRAYGHIEGKNVFYWFQNHKARQRQKQKQETFAYFNRFLHTPQPFFSPPICPNGIRFWFSAMCAPYYIPQGQGEIGFYPPHQKVFVPVGFRRSPSEKVVPTGMISSNGPLVYEGMHQMQQRISDCSNSHFSHQETLDLFPLHPTGILEGKTTTTTDQVSSLASVVSADSSTDTTSADDINEDDHASPLNQPFFNFFTTSGQGSY 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01273 268 ProSiteProfiles 'Homeobox' domain profile. 25 90 IPR001356 GO:0003677
Gma11g01273 268 MobiDBLite consensus disorder prediction 1 30 - -
Gma11g01273 268 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 14 265 IPR044555 GO:0003700|GO:0099402
Gma11g01273 268 CDD homeodomain 31 91 IPR001356 GO:0003677
Gma11g01273 268 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 14 265 - -
Gma11g01273 268 Pfam Homeodomain 29 89 IPR001356 GO:0003677
Gma11g01273 268 SMART HOX_1 27 94 IPR001356 GO:0003677
Gma11g01273 268 MobiDBLite consensus disorder prediction 228 254 - -
Gma11g01273 268 Gene3D - 29 98 - -
Gma11g01273 268 SUPERFAMILY Homeodomain-like 30 97 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01273 Gma-Chr11 10860935 10862433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01273 23 261 Wox Gene Family AT5G59340 40.520 1.97e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma11g01273 Homeodomain 6.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01273 - - gmx:100801698 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01273 11 10860935 10862433 Gma11g01273 11 10860935 10862433 ECH
Gma12g00568 12 4771422 4773109 Gma11g01273 11 10860935 10862433 GST