Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01263 ATGGGAAACGGCATAGGGAAGCTAACGGTGTGCTTCACCGGAAACGGAGGAGGGGGTCGTCGAAAGCAGGATATATCTATTTTAATAACGGAGCCGTTAGACGAGGGTTTGGGTCACTCTTTCTGCTATGTTAGACCCGACCCGACCCGGATTTCTTCGTCGAAGGTCCACTCGGAGGAAACGACGACGTTCAGAACAATCTCGGGCGCGTCGGTGAGCGCAAACACGTCGACGCCGTTATCGACGGCGTTTGTGGATTTGTACTCGTACGGTTGCATCGACAGAGCCGCGGCGTTTGAGAGTTCAACGTCGTTCGCGGCGTTACCACTTCAGCCGATTCCGAGGACCCTCGTGAACTCGGGCCCGTTCTCGGGGAACCTGAACGGCGGTGGGTTTCCCGGCtcgggcccactggagagagggttcatgtcgggcccaatcgagcgcgggttcatgtccgggcccatcgatcgcgggCTTTTTTCGGGCCCGATTGAGAGGGAAGGGAACGGAATCGGAAACGGATCGGATCATTTTCAGAGAAGCTTCTCGCACGGAGGGTTGGGTTTGGGGTTGGGTATGAGAGTGGGAACGAGGAAGGGTAAGTGGATTCGCGTTTTGCAGAGGGCTATTTCCAAGACTCTGTCTCGGGGGCACAATTCAATTGTGGCTCCGATCAAGGGCGTGGTGGTGAAGGAGCCGGAGTGGATGGTGGCAGCGGCGGCGGCAGCGGCGGAGAAGCATAACGAGAATCTGAGCGTGAATTTGAGTAGCGAGGGGAGTTTGGAGGACTATGATTCGATGGAGAGTCAGAATCTTCAATGGGCGCAGGGGAAAGCAGGGGAGGATCGTGTTCATGTTGTGGTGTCTGAGGAACACGGTTGGGTTTTCGTGGGGATCTATGATGGTTTCAGTGGACCTGATGCACCTGATTACCTTCTCTCCAATCTCTACACCGCGGTGCATAAGGAGCTTAAAGGGTTGTTGTGGGATGACGGGTCTGCACCGGAAAATTCAACGATAAAAGAGGACATGTTGCGAGATGTTACTGCAGATGTTACGGTTACTGATGAAGATGATGCTTGTTCTCACTGTGTTGAGCAAGATAATAATGATAATAATAGAAAGAGCAGTAATAAGAGAGGTAGGAATTCGAGGAATAAGTTCAAGGGTGCTGCGAAGAAATGGGAGGAGAATCAACGGAGGTGGAAGTGTGAGTGGGATAGGGAAAGATTGGAGCTTGATCGGAGATTGAAGGAGCAACTGAATTTAAGTCGATCTGGGTCGGGTGGAGCAGCGAGTTCAATTAATCATTCAGATGTTTTGGAGGCTCTTTCTCGGGCTTTAAAGAAGACTGAGGAGTCTTATCTCGATGTGGCGGATAAGATGGTGATGGAGAATCCTGAATTGGCTTTGATGGGTTCGTGTGTTCTTGTGATGTTGATGAAGGGGGAGGATGTTTATGTGATGAATGTAGGGGATAGTCGAGCTGTGCTGGCTCAGAAGGCTGAGCCTGATTACTGGCTTGGCAAGATCAGGCAGGACTTGGAGAGGATCAATGAGGAGACGATGAATGATCTTGAGTCTTGGGATGTTGATACGTCCAACTTGGTACCGAGTTTGAGCGCGATTCAGCTTACCAAGGATCATAGTACTAGTGTTGAGGAAGAAATCCAGAGAATTAAAAAAGAGCACCCGGATGATCCTTTTGCTGTTGTAAATGACCGTGTGAAGGGTTCTCTCAAAGTTACTCGAGCATTTGGTGCCGGATTTCTCAAACAGccaaagtggaacaacgcacttctggagatgtttagaatagactacgtaggaaactctccttacatAAGCTGCCTACCATATCTAAAACACCACAGATTAGGCCCAAAGGACAAATTTTTGATTCTATGCTCTGATGGGCTCTATCAGTACTTGTCAAACGAAGAGGCAGTGGCTGAAGTCGAGCTTTTCATCACATTGCAACCCGAGGGAGACCCGGCTCAGCATTTGGTTGAAGAAGTGTTGTTTCGTGCTGCAAAGAAAGCTGGTTTGGACTTTCACGAGTTGCTCGAAATTCCACAGGGTGATAGGCGCCGTTACCATGATGATGTTTCCATCATTGTTATTTCTTTGGAGGGAAGGATATGGAGATTCTGTGTATAA 2163 0.4623 MGNGIGKLTVCFTGNGGGGRRKQDISILITEPLDEGLGHSFCYVRPDPTRISSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFAALPLQPIPRTLVNSGPFSGNLNGGGFPGSGPLERGFMSGPIERGFMSGPIDRGLFSGPIEREGNGIGNGSDHFQRSFSHGGLGLGLGMRVGTRKGKWIRVLQRAISKTLSRGHNSIVAPIKGVVVKEPEWMVAAAAAAAEKHNENLSVNLSSEGSLEDYDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFSGPDAPDYLLSNLYTAVHKELKGLLWDDGSAPENSTIKEDMLRDVTADVTVTDEDDACSHCVEQDNNDNNRKSSNKRGRNSRNKFKGAAKKWEENQRRWKCEWDRERLELDRRLKEQLNLSRSGSGGAASSINHSDVLEALSRALKKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDVDTSNLVPSLSAIQLTKDHSTSVEEEIQRIKKEHPDDPFAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYISCLPYLKHHRLGPKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRFCV 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01263 720 ProSiteProfiles PPM-type phosphatase domain profile. 264 711 IPR001932 -
Gma11g01263 720 SMART PP2C_4 266 709 IPR001932 -
Gma11g01263 720 PANTHER PROTEIN PHOSPHATASE 2C 21 720 IPR015655 GO:0004722|GO:0006470
Gma11g01263 720 Gene3D - 237 715 IPR036457 -
Gma11g01263 720 Pfam Protein phosphatase 2C 445 667 IPR001932 -
Gma11g01263 720 CDD PP2Cc 434 711 IPR001932 -
Gma11g01263 720 PANTHER PROTEIN PHOSPHATASE 2C 23-RELATED 21 720 - -
Gma11g01263 720 MobiDBLite consensus disorder prediction 364 393 - -
Gma11g01263 720 SUPERFAMILY PP2C-like 279 712 IPR036457 -
Gma11g01263 720 MobiDBLite consensus disorder prediction 364 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01263 Gma-Chr11 10771948 10775193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01263 1 720 PP2C-type Phosphatase Gene Family AT1G07630 66.895 0.0 930
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01263 - - gmx:100810214 1343.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01263 11 10771948 10775193 Gma11g01263 11 10771948 10775193 ECH
Gma12g00562 12 4709332 4712433 Gma11g01263 11 10771948 10775193 GST