Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01260 ATGAAGTGTTTCTATTTCTCAAACGGAGAAGACGAGGATTCCGTGGGGGGAGGAGCGGCGGCGAGTTCGCGCGGCGGCTCCACCTCGCGCGTGTCGTGGGCTCGTTCGCTGAGCCTGATGGACACGCGCAGCAGCAGCCGCTCCCACTTCGACTCCGAGTCGACGGAGTTCTCCGACACGGTGGACTTCCACCACTTCCTGGCGCAGCGCCGCGCCAACGATCTCCGTCTCTTCTCCTTCTCCGACCTGAAATCCGCCACGCGCGCCTTCAGCCGCGCCCTCCTCGTCGGCGAGGGAGGCTTCGGCTCCGTCTACCGCGGCTTCCTCGACCAAAACGACGTCGCGATCAAGCAGCTGAACCGCAACGGCCACCAAGGGCACAAGGAGTGGATCAACGAGGTGAACCTGTTAGGTGTCATGAAGCACCCTAATTTGGTGAAGTTGGTTGGGTACTGTGCCGAAGACGATGAGAGAGGGATTCAGAGGCTTTTGGTTTACGAGTTTATGCCGAATAAGAGCTTGGAGGATCATCTCCTTGCAAGAGTGCCATCGACGATAATCCCTTGGGGAACCAGGTTGAGGATCGCGCAGGATGCGGCGAGGGGTTTGGCGTATCTTCATGAGGAAATGGATTTTCAGCTAATATTTCGGgattttaagacatccaacatcttgctggacgagaatttcaatgcaaagctttctgattttggactggctcggcaaggaccctcagaagggtctggctatgtttcaacagcagttgtcggcaccataggttatgctgcacctgagtatgttcagactggtaagctaactgctaagagtgatgtgtggagctttggtgtagttctttatgagcttatcactgggaggagagctgtagagagaaacctaccaaaaaatgagcaaaagctTTTGGAATGGGTAAGACCTTATGTTTCTGATCCTAGGAAGTTCTATCGTATTGTAGACCCCCGACTTGAGGGACAATACTGCATCAAATCAGCTCATAAACTTGCAATTCTAGCAAACAAATGCATCATGAAGCAGCCAAAGTCCCGTCCAAAAATGAGCGAGGTGGTTGAGTCTCTTGGAAGCATTATTAATGAGATTGTTCCTCAGGATGAACAAATCCCCCAAGCTGCTGTAGTAGCAATTGGAGAAGAAAAAGAAGAAAAGTTATCTGTAGAGAACACTAAACCTGAACCTTCAGCTAAACAAGGGAACTATTACCTGAAGAAGGTTTTTGAATTGAAAGATATTGTCAGCTTAAGAAATAAGTCTATTGGAAGGTTAGATTGGAAAAGTTGGGCACCTGGGCTAGTAAGAACTTGGTGA 1341 0.4094 MKCFYFSNGEDEDSVGGGAAASSRGGSTSRVSWARSLSLMDTRSSSRSHFDSESTEFSDTVDFHHFLAQRRANDLRLFSFSDLKSATRAFSRALLVGEGGFGSVYRGFLDQNDVAIKQLNRNGHQGHKEWINEVNLLGVMKHPNLVKLVGYCAEDDERGIQRLLVYEFMPNKSLEDHLLARVPSTIIPWGTRLRIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDENFNAKLSDFGLARQGPSEGSGYVSTAVVGTIGYAAPEYVQTGKLTAKSDVWSFGVVLYELITGRRAVERNLPKNEQKLLEWVRPYVSDPRKFYRIVDPRLEGQYCIKSAHKLAILANKCIMKQPKSRPKMSEVVESLGSIINEIVPQDEQIPQAAVVAIGEEKEEKLSVENTKPEPSAKQGNYYLKKVFELKDIVSLRNKSIGRLDWKSWAPGLVRTW 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01260 446 Pfam Protein kinase domain 95 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01260 446 ProSiteProfiles Protein kinase domain profile. 90 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01260 446 MobiDBLite consensus disorder prediction 1 27 - -
Gma11g01260 446 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 27 396 - -
Gma11g01260 446 SUPERFAMILY Protein kinase-like (PK-like) 73 365 IPR011009 -
Gma11g01260 446 CDD STKc_IRAK 96 368 - -
Gma11g01260 446 Gene3D Phosphorylase Kinase; domain 1 70 168 - -
Gma11g01260 446 PANTHER OS01G0588500 PROTEIN-RELATED 27 396 - -
Gma11g01260 446 ProSitePatterns Protein kinases ATP-binding region signature. 96 117 IPR017441 GO:0005524
Gma11g01260 446 Gene3D Transferase(Phosphotransferase) domain 1 169 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01260 Gma-Chr11 10745676 10748693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01260 76 366 Glycoside Hydrolase AT3G07070 51.701 3.14e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma11g01260 Pkinase 9.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01260 - - gmx:100305425 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01260 11 10745676 10748693 Gma11g01260 11 10745676 10748693 ECH
Gma12g00559 12 4677262 4679199 Gma11g01260 11 10745676 10748693 GST