Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01254 ATGGATCCTCATTTGAAGTCCAATTTCATCAATGGTGTTAAACCCAGCCAAGTGCCCAACACTGTCGATGTAGAGGATCACTCCTTTGACCCTGTTAATGGGATGATGAAACCCTTTGATTTTGGATTCATGGATAACCGGTTTCTTATTTCGCCTGATCCAAATGCTGCTCAAAATCCCTTTTCCTCGTCCACTGATGAAGACTATCCATTGGATGAGATTGATTTTTCTGCCACTGTCCTACGCTACATAAACCAAATGCTTATGGAAGAGGACTTGGAGGCAAAGCCGTGTATGTTCCATGATACCTTGGCTCTCCAAGCTGCTGAGAAATCATTCTATGAGGTCATTGGTGAGACATACCATTCTTCTTCCATCCAAAACTATCACAACATGGACAGCCCCGATGAGAGTAGCTTCAGTGGTGCAACAACTAGCACTAGTAACTCGTTTGAGTCGCAATGGAATAATGTTGATCTTGCTGACTATAAGCCTTCCATACTGCAAACCACTTTTCCTGCTGACTTTGTTTTCCAGGCCAGTTCGATCCAATCTTCAATGAATACCACAAGCAACTTTGCTGTAACCAATAGTCAATTCTTGGCAAGTTCCGTGGCTGGATTTTTGGATCCAGGTTCAACAAACTTGTTTAGCAAGAGTGAGTCTGTACTGCAATTTGAGAGGGGTGTGGAGGAAGCCAATAAGTTCCTGCCTAAATGGAATCCTTTGGTTTTTGACTTGGAGAACCCATCTTTTAGAATGGTTCCCCCTCAGCAGGTGAAAATTAAGGCGGAGACAGAGAGAGATGAAATTTCTGCTGAGTCAAGAGGAAGGAAGAATCATGAGCGGGAAGATGAAGAAGCAGATTTACAAGATGGGAGAAGCAACAAGCAGTCAGCTGTGTACATTGATGACAGTGAGATATCAGAATTGCTTGATAAGGTCCTGCTGGGCACAGGGTGCAGAAATGAGCAAGCTCCTTCGTGTATTGGTCACGCAGACCTTCCTAATGGGCCATCCTTGGGTAAATTAGAAGAAACAAACAAGTCTGGTGGTGGGAAGAGCCATGTTAAGAAACAAGGCAGCAAGAAGGAAATTGTGGATCTGAGGACATTGTTGATTCTATGCGCACAAGCTGTTTCTTCTGATGATCGCATGTCTGCTAATGAGTTATTGAAGCAGATAAAGCAACATGCTTCTCCACTGGGGGATGGGACTCAGAGGCTGGCCCAATGCTTTGCAAGTGCCCTTGAAGCACGCTTGGTTGGCACCGGAACTCAGATTTATACTGCTTTATCTCACAAAAGAACCTCTGCTGCAGACATGGTGAAAGCTTACCAAATGTATATTTCAGCCTGTCCATTCAAGAAGCTTTCAATGATTTTTGCAAACCATACAATTTTGCATTTAGCCAAGGAAGTTGAAACTCTTCATATTATAGATTTTGGCATCCGTTATGGCTTCCAGTGGCCAGCTCTTATTTATCGTCTATCAAAACAACCCGGTGGGCCTCCCAAGCTGCGCATTACAGGGATAGAGCTCCCACAACCTGGTTTCAGGCCAGCAGAGAGAGTCCAGGAGACGGGGCTTCGACTTACAAGGTATTGTGATCGCTTTAATGTTCCATTTGAGTTCAATGCCATTGCACAGAAATGGGAAACTATCAAAATTGAGGACTTGAAGATAAAGGAAAATGAACTTCTTGTTGCGAATGCTATGTTTCGATTTCAAAATCTACTTGATGAGACAGTTGTGGTGAATAGTCCCCGGGATGCTGTTTTAAAGTTAATAAGGAAGGCAAATCCTGCTATCTTTTTACACGCTAATGTCAATGGGAGCTATAATGCTCCATTCTTTGTGACACGGTTCCGGGAGGCCCTTTTCCATTATTCTACTTTGTTTGATGTGCTTGATACCAATGTTGCTTGTGAAGATCCAATGAGGTTGATGTTTGAGAGAGAGTTCTTTGGGCGGCAGGTAATGAATATTGTAGCTTGTGAGGGTTGTGAGAGGGTTGAGAGGCCTGAGACATACAAGCAATGGCAGGTTAGGAACATGAGAGCTGGATTTAAACAATTGCCCTTGGATAAACATCTCATTAACAAATTAAGATGCAAGTTGAAAGATGCGTACCACAGTGATTTCATGCTTCTTGAAGATGACAACTACATGCTGCAAGGTTGGAAGGGCCGAGTAGTTTATGCTTCCTCCTGTTGGGTGCCTGCATAG 2229 0.4352 MDPHLKSNFINGVKPSQVPNTVDVEDHSFDPVNGMMKPFDFGFMDNRFLISPDPNAAQNPFSSSTDEDYPLDEIDFSATVLRYINQMLMEEDLEAKPCMFHDTLALQAAEKSFYEVIGETYHSSSIQNYHNMDSPDESSFSGATTSTSNSFESQWNNVDLADYKPSILQTTFPADFVFQASSIQSSMNTTSNFAVTNSQFLASSVAGFLDPGSTNLFSKSESVLQFERGVEEANKFLPKWNPLVFDLENPSFRMVPPQQVKIKAETERDEISAESRGRKNHEREDEEADLQDGRSNKQSAVYIDDSEISELLDKVLLGTGCRNEQAPSCIGHADLPNGPSLGKLEETNKSGGGKSHVKKQGSKKEIVDLRTLLILCAQAVSSDDRMSANELLKQIKQHASPLGDGTQRLAQCFASALEARLVGTGTQIYTALSHKRTSAADMVKAYQMYISACPFKKLSMIFANHTILHLAKEVETLHIIDFGIRYGFQWPALIYRLSKQPGGPPKLRITGIELPQPGFRPAERVQETGLRLTRYCDRFNVPFEFNAIAQKWETIKIEDLKIKENELLVANAMFRFQNLLDETVVVNSPRDAVLKLIRKANPAIFLHANVNGSYNAPFFVTRFREALFHYSTLFDVLDTNVACEDPMRLMFEREFFGRQVMNIVACEGCERVERPETYKQWQVRNMRAGFKQLPLDKHLINKLRCKLKDAYHSDFMLLEDDNYMLQGWKGRVVYASSCWVPA 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01254 742 ProSiteProfiles GRAS family profile. 360 740 IPR005202 -
Gma11g01254 742 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 47 741 IPR005202 -
Gma11g01254 742 PANTHER SCARECROW-LIKE PROTEIN 14 47 741 - -
Gma11g01254 742 MobiDBLite consensus disorder prediction 262 293 - -
Gma11g01254 742 MobiDBLite consensus disorder prediction 330 362 - -
Gma11g01254 742 Pfam GRAS domain family 369 739 IPR005202 -
Gma11g01254 742 MobiDBLite consensus disorder prediction 256 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01254 Gma-Chr11 10681268 10684474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01254 80 742 GRAS Transcription Factor Family AT1G07530 55.222 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma11g01254 GRAS 9.5e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01254 - - gmx:100796903 1498.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01254 11 10681268 10684474 Gma11g01254 11 10681268 10684474 ECH
Gma11g01254 11 10681268 10684474 Gma12g00552 12 4619557 4625233 ECH
Gma18g01671 18 46942475 46944877 Gma11g01254 11 10681268 10684474 ECH
Gma07g01236 07 16133120 16136105 Gma11g01254 11 10681268 10684474 ECH
Gma12g00552 12 4619557 4625233 Gma11g01254 11 10681268 10684474 GST
Gma13g03009 13 44572503 44574101 Gma11g01254 11 10681268 10684474 PCT
Gma15g00354 15 3005659 3007820 Gma11g01254 11 10681268 10684474 PCT