Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01252 ATGGACTCCAACTTCCCCGGTGCTTCGGAAGACCAGGGCACACCGTATCTCTCAGACTCGCTTGGTTTTGCAACCATGGAAGACAACGACTTCTCAGAAACTGCAAAGTTCATTAGCCAGATCCTCATGGAAGAAAACGTTGACCAGAAGCCATTCTATGACTCACTCACCTTGCAAGTTACCGAGAAATCCTTCTACGATGCTCTCGCCGGCAACCTACCTCTTTCTCCCGATCAACACCCCGTTCTTCTCAGTCCCGAAGCTGAAaccaccaccaccaccaccaccaccaccagcagcagcagtagcaacaacaatttttcAGATGAATATTCTCGTGAGTTGAAGCTCCGTTCTCCGGATTCTATTTCTGTTTCTGCTTTTCAGTTTAAATCTCAACCACCGCCTTCAGTTACTGTTAGTGACGCAGTCTCAGATTTGGATTCTTCTATTGCCAAACTCTTAGCCCACAATATTTTCAATCATGTTGATTCTGTTTCCCAGTTTAGAAGAGGCTTCGAGGAAGCTAGTAAATTTCTTCCTCCGGGGCCTAACCTTGTAACTGCTCTACATTCAAAGAGAGAAGAACCAATCAATTCTTTTGGAGACAATTCCTATGGGTTGTTGAAGGGTAGAAAGAATCACCAGCGCCAAGAGATAGAAACTAGAGAAGAAGGAGAAGGAGAGAGAAGTAACAAGCAATCAGCACTTTCCCTTGTTGATGAGAGTGACCTGTCAGATGCTTTTGATCGGCTGTTGCTTCATGAAGGAAACCTGTGTGACGAACACATTCGTTTGACGAGTGGATCAGTGAACGTTGAGGAACGAGATGGAGGTAAGGGTCGTTCAAAGAAACAAGGGAGGAGGAAGAAGGAAACGGTGGATTTGAGGAATCTTCTATTGATGTGTTCACAATCTGTGTATGCCAATGACAACAGGACTGCCAATGAATTGCTAAAACAGATTAGGCAACACTCTTCTCCCGTTGGGGATGCATCACAGAGGTTGGCTCATTACTTCACCAATGGCCTCGAAGCACGCTTGGTTGGGGATGGCACAAGTGCACAAGGAATGTATACTTTTCTGAGCTCTAAGAACATCACTGTTGCTGAGTTTCTCAAGGCATACCAGGTTTTCACTTCCTCCAGCCCTTTCAAGAAGTTTATACATTTCTTTGCAAATAAAATGATTATGAAAGCAGCTGCAAAGGCAGAAACCGTTCATATTATTGATTTTGGGATCCTATACGGTTTCCAGTGGCCAATACTCATTAAGTTTTTCTCAAATAGGGAGGGTGGACCTCCCAAGCTTAGGATCACAGGGATAGAGTTTCCCCAACCTGGCTTTCGCCCCGCAGAAAGAATTGAGGAAACAGGTCACCGTCTGGCTAACTATTGTAAGCGTTACAATGTTCCCTTTGAGTACAATGCCATAGCATCGAAGAACTGGGAAAACATTCAGGTTGAAGCCCTCAAAATTCAGAGCAACGAGCTAGTTGCTGTCAATTGTCACTTGAGGTTTGAGAATTTACTGGATGAGTCTATTGAAGTGAACAGTCCTAGAAATGGAGTCCTTCATTTGATCAGGAAGATAAATCCGGATATTTTTACTCAGTCCATCACTAATGGATCATATAATGCCCCTTTCTTTGCCACGCGGTTTAGGGAGGCTCTCTTTCATTATTCTGCTATTTATGATTTGATTGACACAGTCATACCTCGTGAAAACGAATGGAGGTTGATGCTTGAGAGAGAGCTTTTGGGCAGAGAGATTATGAATGTTATAGCATGTGAAGGTTCTGAGAGGATTGAGAGGCCTGAGACATACAAACAGTGGTATGTTAGGAATACGAGGGCTGGTTTCAAGCAGCTCCCGCTAAATGAGGAATTAATGGCCAAATTCAGGACTAAGTTAAAGGAATGGTACCACAGAGATTTTGTCTTCGATGAAGATAACAAGTGGATGCTTCAAGGTTGGAAGGGCCGCATTTTGTATGCTTCCACTTGTTGGGTGCCAGCATAA 2022 0.4263 MDSNFPGASEDQGTPYLSDSLGFATMEDNDFSETAKFISQILMEENVDQKPFYDSLTLQVTEKSFYDALAGNLPLSPDQHPVLLSPEAETTTTTTTTTSSSSSNNNFSDEYSRELKLRSPDSISVSAFQFKSQPPPSVTVSDAVSDLDSSIAKLLAHNIFNHVDSVSQFRRGFEEASKFLPPGPNLVTALHSKREEPINSFGDNSYGLLKGRKNHQRQEIETREEGEGERSNKQSALSLVDESDLSDAFDRLLLHEGNLCDEHIRLTSGSVNVEERDGGKGRSKKQGRRKKETVDLRNLLLMCSQSVYANDNRTANELLKQIRQHSSPVGDASQRLAHYFTNGLEARLVGDGTSAQGMYTFLSSKNITVAEFLKAYQVFTSSSPFKKFIHFFANKMIMKAAAKAETVHIIDFGILYGFQWPILIKFFSNREGGPPKLRITGIEFPQPGFRPAERIEETGHRLANYCKRYNVPFEYNAIASKNWENIQVEALKIQSNELVAVNCHLRFENLLDESIEVNSPRNGVLHLIRKINPDIFTQSITNGSYNAPFFATRFREALFHYSAIYDLIDTVIPRENEWRLMLERELLGREIMNVIACEGSERIERPETYKQWYVRNTRAGFKQLPLNEELMAKFRTKLKEWYHRDFVFDEDNKWMLQGWKGRILYASTCWVPA 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01252 673 MobiDBLite consensus disorder prediction 1 19 - -
Gma11g01252 673 ProSiteProfiles GRAS family profile. 287 671 IPR005202 -
Gma11g01252 673 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 24 672 IPR005202 -
Gma11g01252 673 MobiDBLite consensus disorder prediction 88 110 - -
Gma11g01252 673 MobiDBLite consensus disorder prediction 275 291 - -
Gma11g01252 673 MobiDBLite consensus disorder prediction 1 21 - -
Gma11g01252 673 MobiDBLite consensus disorder prediction 210 231 - -
Gma11g01252 673 MobiDBLite consensus disorder prediction 271 291 - -
Gma11g01252 673 Pfam GRAS domain family 296 670 IPR005202 -
Gma11g01252 673 MobiDBLite consensus disorder prediction 88 113 - -
Gma11g01252 673 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 24 672 - -
Gma11g01252 673 MobiDBLite consensus disorder prediction 201 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01252 Gma-Chr11 10673720 10676295 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01252 36 673 GRAS Transcription Factor Family AT1G07530 47.346 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma11g01252 GRAS 9e-117 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01252 - - gmx:100795855 1280.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01252 11 10673720 10676295 Gma11g01252 11 10673720 10676295 ECH
Gma11g01252 11 10673720 10676295 Gma12g00551 12 4613052 4615756 ECH