Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01251 ATGGTTGAGAGAGAGCTTTTGGGCAGGGAGATTATGAATTTTATAGCATGTGAAGGTTCTGAGAGGATTGAGAGGCCTGAGACATACAAACAGTGGCAGGTTAGGAATATGAAGGCTGGTTTCAAGCAGTTACCACTGGATGAAGAATTAATGGCCAAATTCAGGAGTAAGTTAAAGGAATACCACAGAGATTTTGTCTTAGATGAAAATAACAACTGGATGCTTCAAGCATGCTGCAATGGTGAAGCTTATTTTGCTGGTTACAATGTTTCAAGTTCTGATATCCTTGGTCTCTGGCTACCTACTTTCTTAACCTTCAGAGTCAAAACCTATTTCAGTGTTGTTGGTTTTGGTGAAGACGATGGCATAGCGTATCTCTCAGACTCGCTTGGTTTTGCAACCATGGAAGACAACGACTTCTCAGAAACTGCAAAGTTCATTAGCCAGATCCTCATGGAAGAAAACGTTGAACTTGAACAGAGCCCATTCTACGACTCACTCACTCTGCAAGTTACTGAGAAATCCTTCTACGACGCTCTCGCCGGTAACCTACTTCTCAGTCCCCAAGCTAGCAACACCAATTTTTCAGTTGAAAATTCTCGTGAGTTGAACCTCCCTTCCCCAGATTCTCTTTCTGTTTCTGCTCTTCAGTTTAACCCCCACGCACTCTCTCAACCACCACCTTTGGTTAATGTTAGTGAAGGAGTCTCTGATTTGGACTCTTCTATTGCAAGACTCTTAGCACATAATATTTTCAATGATGTTGATTCTGTTTCCCACTTTAGGAGAGGCTTCGAGGAAGCTAGTAGATTTCTTCCTCCAGGGCCTAACCTTGTAACTGCTCTACATTCAAACGCGCAAGAACCAATCAATTCTTTTCGAGAGAATTCCTATGGGTTGTTGAAGGGTAGAAAGAATCTTGAGCGCCAAGAGATAAACACTAGAGAAGAAGAAAGAGGAGGGAGAAGTAACAAGCAATCAGCATTTTCCTTTGTTGATGAGAGTGACCTGTCAGATGCTATTGATAGGGTGTTTCTTAGTGTGGAAAACGTGTGTAGTGAACACAGTTCTTTGCAGAGTGGACCACTGAGAGCGGAGGAGCAAGATCGAGGGAAGGGTCTTTCAAAGAAACAAGAGAGGAGGAAGCAGGAAACAGTGGATTTGAGGAATCTTCTGTTGATGTGTTCACAATCTGTGTATGCCAATGACAACAGGACTGCCAATGAATTGCTAAAACAGATTAGGCAACACTCTTCTCCCGTTGGGGATGCATCACAGAGGTTGGCTCATTACTTCGCCAATGGCCTCGAGGCACGCTTGGTTGGGGATGGTACAAGTTCGCAAGGAATGTATACTTTTCTGAGCTCTAAGAACATCACTGCTGCAGAGTTTCTGAAGACACACCAAGATTTTATGTCCGCCAGCCCTTTCAAGAAGTTTACATATTTCTTTGCTAATAAAATGATTATGAAAGCAGCTGCCAAGGTAGAAACCGTCCATATTATTGATTTTGGTATCCTATATGGTTTCCAGTGGCCAATTCTTATCAAGTTTTTGTCAAATAGGGAGGGTGGACCTCCCAAGCTTAGAATAACGGGGATAGAGTTTCCCCAACCCGGCTTTCGTCCCACAGAAAAAATTGATGAGACTGGTCGCCGTCTGGCTAACTATTGTAAGCGTTATAGTGTTCCCTTTGAGTACAATGCCATAGCATCAAAGAACTGGGAAACCATTCGGATTGAAGCCCTAAAAATTGAGAGCAACGAGCTAGTTGCTGTCAACTGTCACCAGAGGTTTGAGAATTTACTGGATGACTCTATTGAAGTGAACAGTCCTAGAAATGCAGTCCTGCATTTGATCAGGAAGATAAATCCAAATATTTTTACTCAGTCCATCACTAATGGATCATATAATGCCCCGTTCTTTGCCCCGCGGTTTAGGGAGGCTCTCTTTCATTATTCTGCTATTTATGATCTGATTGACACTATCATACATCGTGAAAATGAAAGGAGATTGATGATTGAGAGAGAGCTTTTGGGCAGGGAGATTATGAATGTTATAGCATGTGAAGGTTCTGAGAGGATTGAGAGGCCTGAGACCTACAAACAGTGGCAGGTTAGGAATATGAAGGCTGGTTTCAAGCAGCTACCACTGGATGAGGAATTAATGGCCAAATTTAGGACTGAGTTAAGAAAGTGGTACCACAGAGATTTTGTCTCAGATGAAGATAGCAACTGGATGCTTCTAGGTTGGAAGGGCCGCATTTTGTTTGCTTCCACTTGTTGGGTGCCAGCATGA 2298 0.4286 MVERELLGREIMNFIACEGSERIERPETYKQWQVRNMKAGFKQLPLDEELMAKFRSKLKEYHRDFVLDENNNWMLQACCNGEAYFAGYNVSSSDILGLWLPTFLTFRVKTYFSVVGFGEDDGIAYLSDSLGFATMEDNDFSETAKFISQILMEENVELEQSPFYDSLTLQVTEKSFYDALAGNLLLSPQASNTNFSVENSRELNLPSPDSLSVSALQFNPHALSQPPPLVNVSEGVSDLDSSIARLLAHNIFNDVDSVSHFRRGFEEASRFLPPGPNLVTALHSNAQEPINSFRENSYGLLKGRKNLERQEINTREEERGGRSNKQSAFSFVDESDLSDAIDRVFLSVENVCSEHSSLQSGPLRAEEQDRGKGLSKKQERRKQETVDLRNLLLMCSQSVYANDNRTANELLKQIRQHSSPVGDASQRLAHYFANGLEARLVGDGTSSQGMYTFLSSKNITAAEFLKTHQDFMSASPFKKFTYFFANKMIMKAAAKVETVHIIDFGILYGFQWPILIKFLSNREGGPPKLRITGIEFPQPGFRPTEKIDETGRRLANYCKRYSVPFEYNAIASKNWETIRIEALKIESNELVAVNCHQRFENLLDDSIEVNSPRNAVLHLIRKINPNIFTQSITNGSYNAPFFAPRFREALFHYSAIYDLIDTIIHRENERRLMIERELLGREIMNVIACEGSERIERPETYKQWQVRNMKAGFKQLPLDEELMAKFRTELRKWYHRDFVSDEDSNWMLLGWKGRILFASTCWVPA 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01251 765 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 76 IPR005202 -
Gma11g01251 765 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 130 764 IPR005202 -
Gma11g01251 765 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 130 764 - -
Gma11g01251 765 ProSiteProfiles GRAS family profile. 379 763 IPR005202 -
Gma11g01251 765 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 1 76 - -
Gma11g01251 765 Pfam GRAS domain family 1 76 IPR005202 -
Gma11g01251 765 Pfam GRAS domain family 388 762 IPR005202 -
Gma11g01251 765 MobiDBLite consensus disorder prediction 357 382 - -
Gma11g01251 765 MobiDBLite consensus disorder prediction 365 382 - -
Gma11g01251 765 ProSiteProfiles GRAS family profile. 1 100 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01251 Gma-Chr11 10663919 10671722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01251 145 765 GRAS Transcription Factor Family AT1G07530 45.677 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma11g01251 GRAS 1.6e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01251 - - gsj:114377142 1522.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01251 11 10663919 10671722 Gma11g01251 11 10663919 10671722 ECH
Gma12g00550 12 4606638 4608976 Gma11g01251 11 10663919 10671722 GST
Gma11g01251 11 10663919 10671722 Gma13g03010 13 44582413 44584268 PCT
Gma11g01251 11 10663919 10671722 Gma15g00353 15 2995010 2996868 PCT