Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01248 ATGAAAATTCTTGGTAGGAAGAATCATGAGCGTGAAGATATAGACACCAGAAAAGAAGAAGAAGAAGAAGAAAGGAGAAGTAACAAGCAATCAGCACTTAACCTTGTTGATGAGAGTGACTTGTCTGATGCTTTTGATCGTATGGTTATGCTAAGTGTGGAAAACGTGTGTAATGAACACTGTAGTTTGCAGAGTGAAACAATGAAAGCTGTAGAGGCAAGTGGAGGGAAGAGTCTTCCTAAGAAACAAGGGACAAAGGACGAAACAATTAGGCAGCACTCTTCTCCCTCTGGGGATGCATTACAGAGGTTGGCTCATTACTTTGTCAATGGCCTCGAGGCTCGCTTGGTTGGGGAAGGAATGTTTTCTTTTTTGAGCTCTAAGAGGAGCCCTGCTGCAGAGTTTCTGAAGGCACACCAAACTAAAGGTTTTGATATCCTTGCTCTGGCAGTGGCTGCCGACTTTGCTTTACCTTCAGGTGCTATGATGAAGATTGAACCATGTTCTGCAATAAGTTAG 519 0.4316 MKILGRKNHEREDIDTRKEEEEEERRSNKQSALNLVDESDLSDAFDRMVMLSVENVCNEHCSLQSETMKAVEASGGKSLPKKQGTKDETIRQHSSPSGDALQRLAHYFVNGLEARLVGEGMFSFLSSKRSPAAEFLKAHQTKGFDILALAVAADFALPSGAMMKIEPCSAIS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01248 172 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 90 IPR005202 -
Gma11g01248 172 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 89 141 IPR005202 -
Gma11g01248 172 MobiDBLite consensus disorder prediction 1 35 - -
Gma11g01248 172 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 6 90 - -
Gma11g01248 172 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 89 141 - -
Gma11g01248 172 Pfam GRAS domain family 89 139 IPR005202 -
Gma11g01248 172 MobiDBLite consensus disorder prediction 1 31 - -
Gma11g01248 172 MobiDBLite consensus disorder prediction 68 97 - -
Gma11g01248 172 Coils Coil 4 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01248 Gma-Chr11 10653000 10654897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01248 2 141 GRAS Transcription Factor Family AT1G07530 36.111 1.23e-20 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma11g01248 GRAS 8e-07 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01248 - - pvu:PHAVU_011G063100g 138.272