Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01247 ATGCTCTCCACGGATTCCCTTTTGGAAAATTTCCCTTTTGTAAACGGTCCTATCTCGGTGTTTTCGAATCAGAATCCGGAAAGTGGGTTCAAGGTGGATGATTCATGTTCCCCTTCAGAATCTGTCACTGATTCTGGTCCTTCTTCTGGGACAAGCTCGAATGGAGAACATGCAGAGAGTACTAAGCACTCCAATCCCATTCTCAGATACATTAGTGACATCCTCATGGATGAAGAAGTTGATTTGGAGCGAAAACCCTGCATGTTGCAGGATTGTTTGAGACTTCAGGCTGCTGAAAAATCATTCTATGATGCATTGGTTCGTAGTTACCCTTCATCAACTGGTCAATTTAATGATAATCCTGACCCAGATGATAATTTTGGTGGAACTACTAGTTCTGAGAGTTTTAGCAGTTATACCACTGATAATTCATGCGAGTCTGATTGGTTTAACGGTGCTAGTGACTTGGATTCCTCTTTCCTACAAAGATCTCTAATTGATTCTCTGGAACACACATATGTAGCTCCTGATCTGTTTAGAGAGACACAAGCTGGGGTCCATTTTTCAAATGGAGCCTGGAATTTGATTCACTTGCAGAACAAGCCACGTGCTATTGAGGATGGTGTGATGCGGGGTTCTGTAACAGCCACAGGATTGAGGGAGAAGAGGAGCTATCAAATGAATGATATCTCACATGAAGAAGAGGAGAAAAGCAACAAGCTTTCAGCTGTCTACTTGGATGATTCGGAGCCATCTAGCATGTTTGATGATGTGCTGCTGTGTAAGGATGGTAAGAGTCCATCTATTTTTTATGCTGGCCGTGAACCGTCACCATCGCAGATTGCTGACTCAGGAGGATCTAATGGGAAGAAAACACGATCGAAGAAAGGTTCCAACAAGAGGACAAGTGCAAGCGCAACGGTGGATTTATGGACTTTGCTAACTCAATGTGCACAGGCTGTGGCTAGCTTTGACCAAAGGACTGCAAATGAAACACTCAAGCAGATTAGGCAGCACTCTTCACCTTATGGCGATGGACTTCAGCGTTTGGCTCATTACTTTGCCGATGGCCTTGAGAAACGGTTAGCTGCTGGGACACCAAAGTTCATTTCCTTTCAATCAGCATCTGCCGCAGATATGTTGAAAGCCTACAGAGTGTATATCTCAGCATCACCATTTCTCAGGATGTCAAATTTCTTGGCTAACAGCACTATTCTGAAGCTAGCACAAAATGAAAGCAGTATTCACATTATTGACTTTGGGATTAGCTATGGTTTCCAGTGGCCTTGCCTCATCCAACGGCTTTCAGAGAGGCCGGGCGGGCCTCCAAAGCTTCGTATGATGGGAATTGATCTTCCCCAGCCGGGATTTAGGCCGGCGGAAAGGGTTGAGGAGACAGGGCGGTGGCTGGAGAAGTACTGCAAGAGGTTTGGAGTCCCATTTGAGTACAATTGCCTTGCACAAAAATGGGAAACTATAAGACTTGAAGACCTCAAAATTGATAGGAGTGAAGTAACTGTGGTTAACTGTTTGTACAGATTGAAGAACCTATCCGATGAAACCGTGACTGCCAACTGTCCAAGAGATGCTTTGCTGAGGTTGATCAGGAGGATCAATCCAAACATCTTCATGCACGGGATCGTCAACGGCACTTACAATGCACCGTTTTTCGTGACAAGGTTCAGGGAAGCACTCTTCCACTTCTCATCATTGTTTGACATGTTTGAAGCCAATGTGCCTCGTGAAGATCCATCTAGGCTTATGATTGAGAAAGGGTTGTTTGGAAGGGATGCAATCAATGTGATAGCATGTGAGGGGGCAGAGAGGGTTGAAAGGCCAGAAACCTACAAGCAGTGGCAAGTCAGGAACCAGAGAGCAGGGTTCAAGCAACTTCCATTGGCCCAAGAGCATGTGAATAGAGTGAAGGAAATGGTGAAGAAGGAATACCATAAAGATTTTGTAGTTGGTGAGGATGGCAAGTGGGTTTTGCAAGGATGGAAAGGGCGAATTCTTTTTGCTGTTTCTTCTTGGACTCCTGCTTGA 2043 0.4493 MLSTDSLLENFPFVNGPISVFSNQNPESGFKVDDSCSPSESVTDSGPSSGTSSNGEHAESTKHSNPILRYISDILMDEEVDLERKPCMLQDCLRLQAAEKSFYDALVRSYPSSTGQFNDNPDPDDNFGGTTSSESFSSYTTDNSCESDWFNGASDLDSSFLQRSLIDSLEHTYVAPDLFRETQAGVHFSNGAWNLIHLQNKPRAIEDGVMRGSVTATGLREKRSYQMNDISHEEEEKSNKLSAVYLDDSEPSSMFDDVLLCKDGKSPSIFYAGREPSPSQIADSGGSNGKKTRSKKGSNKRTSASATVDLWTLLTQCAQAVASFDQRTANETLKQIRQHSSPYGDGLQRLAHYFADGLEKRLAAGTPKFISFQSASAADMLKAYRVYISASPFLRMSNFLANSTILKLAQNESSIHIIDFGISYGFQWPCLIQRLSERPGGPPKLRMMGIDLPQPGFRPAERVEETGRWLEKYCKRFGVPFEYNCLAQKWETIRLEDLKIDRSEVTVVNCLYRLKNLSDETVTANCPRDALLRLIRRINPNIFMHGIVNGTYNAPFFVTRFREALFHFSSLFDMFEANVPREDPSRLMIEKGLFGRDAINVIACEGAERVERPETYKQWQVRNQRAGFKQLPLAQEHVNRVKEMVKKEYHKDFVVGEDGKWVLQGWKGRILFAVSSWTPA 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01247 680 MobiDBLite consensus disorder prediction 29 63 - -
Gma11g01247 680 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 679 IPR005202 -
Gma11g01247 680 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 21 679 - -
Gma11g01247 680 MobiDBLite consensus disorder prediction 113 139 - -
Gma11g01247 680 Pfam GRAS domain family 312 678 IPR005202 -
Gma11g01247 680 MobiDBLite consensus disorder prediction 271 301 - -
Gma11g01247 680 ProSiteProfiles GRAS family profile. 301 678 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01247 Gma-Chr11 10638869 10640911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01247 64 679 GRAS Transcription Factor Family AT2G29060 46.486 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma11g01247 GRAS 8.1e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01247 - - gmx:100793210 1355.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01247 11 10638869 10640911 Gma11g01247 11 10638869 10640911 ECH
Gma12g00549 12 4593640 4596470 Gma11g01247 11 10638869 10640911 GST
Gma13g03013 13 44601141 44603633 Gma11g01247 11 10638869 10640911 PCT
Gma15g00351 15 2978156 2985519 Gma11g01247 11 10638869 10640911 PCT
Gma11g01247 11 10638869 10640911 Gma13g03013 13 44601141 44603633 PCT
Gma11g01247 11 10638869 10640911 Gma15g00351 15 2978156 2985519 PCT