Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01226 ATGAGAGAAGAGTTTGAAATCCTAAAAAGGGAGTTTCCTCGTGTAAGAGGCCCACAACAATTCCCAATTCCATCCACCTCTTCACTTCTACTGATTGCTGAATCAAATGGAACACGAGAAAGCCCCTATCTTGGACACGAAAACAGTGCTGTGGCATCAAAAGAGTCATCAAAGAAACTCTCTGGACTCATTGTTTTCTATGCTATTGTTATGGTTGTGGAACTTATTGGTGGAATAAAAGCTCACAGCCTATCTGTCATCAGTGATGCAGCACACTTACTTTCTGATATTGCTGGATTCTCTATCTCTCTCTTTGCAGTGTGGGCTTCAGGTTGGGAGGCAACGCCGCACCAATCTTTTGGATACAATCGTCTTGAGGTTTTGGGGGCTCTTGTATCTGTGCAGTTAATTTGGTTGATATCCGGTTTTTTGATATATGAAGCAGTAGGTAGAATTCTCGTCCGAAATGGCAGTGTGAATGGAAAGCTCATGCTTGCAATTGCAGCACTTGGtcatcatcaataccagacagatcatgatcatGGGAAGGAGGAACAATCTAAAATAACTGATGAGGAGAATGTTACCCTGGTTTCAAGTAGTCAGACAAATACTAATGTCTTGAACATAAATCTTCAGGGGGCATATTTGCATGTCATGGCTGATATGATTCAATCTATTGGAGTGATGATTGCTGGAGCCATAATATGGGCAAAACCTGAGTGGTTTATGGTTGACCTTGTGTGTACTCTTATATTTTCTGTTTTGTCAGTAAGCACTACTCTTCCCTTGCTTAGGAATATTTATGGCATTCTGATGGAAAGGACACCAAGTGAGATCGATATTAGTAAGCTGGAAAGTGGCCTCAGAAATATCAAGGGAGTGCAGGATGTTCATGACTTGCACGTTTGGGCTATAACTGTTGGAAAATGTGTTCTGTCTTGCCACGTAGTGGCTGAGCCTGGCATAAGTTCCATTGATTTACTAGGCACGATTAAAAATTACTGTGAAAAAAAATATCAAATACAACATGTAACCATACAAATTGAATAA 1053 0.3951 MREEFEILKREFPRVRGPQQFPIPSTSSLLLIAESNGTRESPYLGHENSAVASKESSKKLSGLIVFYAIVMVVELIGGIKAHSLSVISDAAHLLSDIAGFSISLFAVWASGWEATPHQSFGYNRLEVLGALVSVQLIWLISGFLIYEAVGRILVRNGSVNGKLMLAIAALGHHQYQTDHDHGKEEQSKITDEENVTLVSSSQTNTNVLNINLQGAYLHVMADMIQSIGVMIAGAIIWAKPEWFMVDLVCTLIFSVLSVSTTLPLLRNIYGILMERTPSEIDISKLESGLRNIKGVQDVHDLHVWAITVGKCVLSCHVVAEPGISSIDLLGTIKNYCEKKYQIQHVTIQIE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01226 350 Gene3D Cation efflux protein transmembrane domain 57 272 IPR027469 -
Gma11g01226 350 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 277 350 IPR036837 -
Gma11g01226 350 Pfam Cation efflux family 64 273 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Gma11g01226 350 TIGRFAM CDF: cation diffusion facilitator family transporter 58 350 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Gma11g01226 350 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 38 171 - -
Gma11g01226 350 PANTHER METAL TOLERANCE PROTEIN B 38 171 - -
Gma11g01226 350 PANTHER METAL TOLERANCE PROTEIN B 172 350 - -
Gma11g01226 350 SUPERFAMILY Cation efflux protein transmembrane domain-like 58 274 IPR027469 -
Gma11g01226 350 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 172 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01226 Gma-Chr11 10447647 10451687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01226 54 350 Inorganic Solute Cotransporters AT2G29410 49.068 1.32e-109 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01226 K14689 - gmx:100789520 582.408