Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01199 ATGAATATGTGTTCTAAATGCCACAAAGACATGTTGCTGAAACAGGAGCAGGCCAAGCTTGCAGCATCATCCATTGGGAATATTATGAATGGGTCTTCAAGCAGCACTGAAAAGGAACCTGTTGTTGCCGCTGCTGCTGCTAATGTTGATATCCCAGTTATTCCAGTAGAGCCTAAAACTGTCTCTGTGCAACCTTTATTTGGTTCAGGTCCAGAAGGGAGTGGTGAGGCAAAGCTGAAGGATGGACCAAAACGCTGCAGCAGCTGCAACAAGCGAGTTGGTTTGACAGGGTTTAATTGTCGATGTGGTGACCTTTTTTGTGCTGTACATCGCTACTCAGACAAGCATAATTGCCCATTTGATTACCGCACTGCTGCTCGGGATGCCATAGCTAAAGCAAACCCAGTTGTCAAGGCTGAGAAGCTTGATAAGATCTAA 438 0.4566 MNMCSKCHKDMLLKQEQAKLAASSIGNIMNGSSSSTEKEPVVAAAAANVDIPVIPVEPKTVSVQPLFGSGPEGSGEAKLKDGPKRCSSCNKRVGLTGFNCRCGDLFCAVHRYSDKHNCPFDYRTAARDAIAKANPVVKAEKLDKI 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01199 145 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 145 - -
Gma11g01199 145 MobiDBLite consensus disorder prediction 65 85 - -
Gma11g01199 145 PANTHER ZINC FINGER AN1 DOMAIN STRESS-ASSOCIATED PROTEIN 1 145 - -
Gma11g01199 145 Gene3D - 69 141 IPR035896 -
Gma11g01199 145 SUPERFAMILY AN1-like Zinc finger 76 140 IPR035896 -
Gma11g01199 145 SMART AN1_Zf_4 86 123 IPR000058 GO:0008270
Gma11g01199 145 Pfam AN1-like Zinc finger 86 122 IPR000058 GO:0008270
Gma11g01199 145 Gene3D - 1 40 - -
Gma11g01199 145 ProSiteProfiles Zinc finger AN1-type profile. 80 126 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01199 Gma-Chr11 10246538 10246975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01199 74 145 C2H2 Transcription Factor Family AT3G52800 56.944 3.12e-27 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01199 - - gmx:100500070 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01199 11 10246538 10246975 Gma11g01199 11 10246538 10246975 ECH
Gma11g01199 11 10246538 10246975 Gma12g00501 12 4191705 4195580 ECH
Gma03g01294 03 39078968 39079390 Gma11g01199 11 10246538 10246975 ECH
Gma19g01349 19 42787844 42790454 Gma11g01199 11 10246538 10246975 ECH
Gma12g00501 12 4191705 4195580 Gma11g01199 11 10246538 10246975 GST