Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01197 ATGGATTCAGCAACAACAGCTCCTCCCCCATCGCAGGAGCTGGACTTGGACAACCTCAAACTCCTCAAAGTCCTAGGAAAAGGCGCCATGGGAACTGTCTTCCTCGTACAAGACACAACCAACACCCCCTTCGCCCTCAAAGTGGTGGACAAAACGTGCGTCCACGCGAAGCTCGACGCGGAACGGCGCGCGCGTTGGGAAATCCAAGTCCTCTCAACGCTCTCCCACCCTTTCCTCCCTTCCCTCATGGGAACGTTGGAGTCCCCACAGTTCCTGGCGTGGGCCCTACCCTACTGCCCCGGCGGCGACCTCAACTTCCTCCGCTACCGCCAAACCGACCGCTCCTTCTCCCCCGCCGTCATCCGCTTCTACGTCGCCGAAATTCTCTGCGCTCTCGACCACCTCCATTCCATGGGCATCGCCTACCGCGACCTAAAACCCGAAAATGTCCTCGTCCAAAACACCGGCCACGTCACCCTCACCGATTTCGACCTCTCCCGAAAGCTCAATCCCAAACCTAAACCTAATCCTAACCCTGTCATCGTTCCTTCAATCCCCTTGCCAAATTCCAACGTTCCCCAACCTCGCCGCAAGCACCGCCGGAATTTATCCCGGTGGATCTCCTTCTTCCCGCCGGACGGGACTAACAACAACAACAAAAACGGTCTCAAGAAGGCCAAGTCCGCGCAAGTCAGCCCGGTGAGTCGGAGAAAACCGAGTTTCTCCAGCGGCGAACGATCCAACTCGTTCGTCGGCACTGAAGAATACGTCTCGCCAGAGGTCGTCCGAGGCGACGGACATGAGTTCGCCGTCGATTGGTGGGCGCTTGGAATACTAATCTACGAAATGCTCTACGGTAAGACGCCGTTCAAGGGAAGGAATCGTAAGGAAACGTTTCGGAACGTTATCATGAAGCCGCCGGAGTTCGTCGGAAAACGAACGGCGTTAACCAACCTTATTGAAAGGTTGTTGGAGAAGGATCCGACGAAGCGTTTGGGTTACACGCGCGGTGCCGCGGAGATCAAGGAGCACGAGTTTTTCCGAGGGGTTCAGTGGGAGCTTTTGACGGAGGTGGTGCGGCCGCCGTTCATACCGTCGGGGGACGACGGCGCCGGAGAGATGACGGAGAGGTTCTCCGATCGAAATTGTGGCGTCAATATTAGGGATTACTTTCAGAATCTTAAATCGTCGCCGTCGGGCAGGTTTGAGAAGAATGTTTCGCTAAGGGAATTCTAA 1236 0.5607 MDSATTAPPPSQELDLDNLKLLKVLGKGAMGTVFLVQDTTNTPFALKVVDKTCVHAKLDAERRARWEIQVLSTLSHPFLPSLMGTLESPQFLAWALPYCPGGDLNFLRYRQTDRSFSPAVIRFYVAEILCALDHLHSMGIAYRDLKPENVLVQNTGHVTLTDFDLSRKLNPKPKPNPNPVIVPSIPLPNSNVPQPRRKHRRNLSRWISFFPPDGTNNNNKNGLKKAKSAQVSPVSRRKPSFSSGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILIYEMLYGKTPFKGRNRKETFRNVIMKPPEFVGKRTALTNLIERLLEKDPTKRLGYTRGAAEIKEHEFFRGVQWELLTEVVRPPFIPSGDDGAGEMTERFSDRNCGVNIRDYFQNLKSSPSGRFEKNVSLREF 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01197 411 Gene3D Transferase(Phosphotransferase) domain 1 244 366 - -
Gma11g01197 411 ProSiteProfiles Protein kinase domain profile. 19 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01197 411 MobiDBLite consensus disorder prediction 166 248 - -
Gma11g01197 411 Pfam Protein kinase domain 242 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01197 411 Pfam Protein kinase domain 21 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01197 411 ProSitePatterns Protein kinases ATP-binding region signature. 25 47 IPR017441 GO:0005524
Gma11g01197 411 Gene3D Phosphorylase Kinase; domain 1 18 102 - -
Gma11g01197 411 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 14 398 - -
Gma11g01197 411 ProSiteProfiles AGC-kinase C-terminal domain profile. 348 411 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gma11g01197 411 Gene3D Transferase(Phosphotransferase) domain 1 103 171 - -
Gma11g01197 411 MobiDBLite consensus disorder prediction 209 248 - -
Gma11g01197 411 MobiDBLite consensus disorder prediction 172 190 - -
Gma11g01197 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Gma11g01197 411 SMART serkin_6 19 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01197 411 SUPERFAMILY Protein kinase-like (PK-like) 16 366 IPR011009 -
Gma11g01197 411 PANTHER FLIPPASE KINASE 1-RELATED 14 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01197 Gma-Chr11 10210714 10212178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01197 14 399 AGC Kinase Gene Family AT3G20830 59.148 5.30e-159 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gma11g01197 Pkinase 4.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01197 - K08286 gmx:100782070 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01197 11 10210714 10212178 Gma11g01197 11 10210714 10212178 ECH
Gma12g00498 12 4145000 4146456 Gma11g01197 11 10210714 10212178 GST
Gma13g03049 13 44854120 44855654 Gma11g01197 11 10210714 10212178 PCT
Gma11g01197 11 10210714 10212178 Gma13g03049 13 44854120 44855654 PCT