Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01177 ATGATCTTTTTCTTTTTTCTTTTTTCCTCTCATTTGTATAAACATTTTTCTTTTTTGCACTTTTTGCAGGTGTGTCATGAGCACGGAGTTATACACAGGGACTTGAAACCTGAAAATTTCTTATTTGCAGATACAAGCGAGAGTGCTCCATTGAAGTCAATTGATTTTGGCCTTTCCACCTTCTATGAGTCCGGAGAAAGATTCAGTGAAATTGTTGGAAGTCCTTATTACATGGCTCCAGAGGTTTTAAGACGTAACTATGGACAAGAAATTGATGTTTGGAGCACAGGAGTTATTCTTTATATTTTACTTTGTGGAGTTCCACCCTTTTGGGCAGAATCCGAGGAAGGGATTGCACAAGCCATCATCAGGGGCAAAGTAGATTTCACAAGAGATCCGTGGCCTAAAGTTTCTGATGAAGCAAAACATCTAGTTAAGCGCATGCTTGATCCAAATCCATTCACCCGGATAACAGTTCAAGAAGTTCTTGATAATTCCTGGATACAAAATAGGGAGCATGGTCGAACTATTTCTCTTGGAGATCAAGTGAGAATGAGGATCAAGCAATTCTCCTTGATGAACAGATTCAAAAGGAAGGTTCTTAGAGTGGTGGCCGATAACCTGTCAGATGAGCAAATTGATGTGTTTAAGCAAATGTTCAATATGATGGATAAGGACAAGAATGGAAACTTGTCATTTGAAGAGCTCAGAGATGGCCTTTCAATGATTGGACACGCCATTCCTGATCCTGATGTTGAAATGTTAATGGATGCTGCAGATATTGATGGAAACGGCACCCTCAATTATGAGGAGTTCATCACAATGAGTGTTCATCTGAGAAAGATAGAGAGTGATGAGCATCTCTCTGAAGCGTTCCGTTACTTTGACAAGAACCAGAGTGGATATGTTGAGTTTGAGGAGTTGAAAGATGCACTATCAGATGATGACTCGGAAGCCAGTGACGACCAAGTGGTCAAAGACATTCTAAACGATGTTGATTTGGATAAGGATGGTCGAATCAGTTTTGAGGAGTTTAAGGCAATGATGAATACAGGAGGAGATTGGAAAATGGCCTCTCGCCAGTATTCAAGAGCATTGTTGAATGCATTAAGCTTCAAAATGTTCAAAGACACATCTAGCAATTCTGTTAAGTGTAACTAA 1161 0.3971 MIFFFFLFSSHLYKHFSFLHFLQVCHEHGVIHRDLKPENFLFADTSESAPLKSIDFGLSTFYESGERFSEIVGSPYYMAPEVLRRNYGQEIDVWSTGVILYILLCGVPPFWAESEEGIAQAIIRGKVDFTRDPWPKVSDEAKHLVKRMLDPNPFTRITVQEVLDNSWIQNREHGRTISLGDQVRMRIKQFSLMNRFKRKVLRVVADNLSDEQIDVFKQMFNMMDKDKNGNLSFEELRDGLSMIGHAIPDPDVEMLMDAADIDGNGTLNYEEFITMSVHLRKIESDEHLSEAFRYFDKNQSGYVEFEELKDALSDDDSEASDDQVVKDILNDVDLDKDGRISFEEFKAMMNTGGDWKMASRQYSRALLNALSFKMFKDTSSNSVKCN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01177 386 ProSitePatterns EF-hand calcium-binding domain. 224 236 IPR018247 -
Gma11g01177 386 ProSiteProfiles Protein kinase domain profile. 1 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01177 386 SMART serkin_6 2 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01177 386 Pfam EF-hand domain pair 286 349 IPR002048 GO:0005509
Gma11g01177 386 Gene3D Transferase(Phosphotransferase) domain 1 13 176 - -
Gma11g01177 386 ProSitePatterns EF-hand calcium-binding domain. 260 272 IPR018247 -
Gma11g01177 386 CDD EFh 216 275 IPR002048 GO:0005509
Gma11g01177 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 30 42 IPR008271 GO:0004672|GO:0006468
Gma11g01177 386 PANTHER SERINE/THREONINE-PROTEIN KINASE 18 366 - -
Gma11g01177 386 ProSiteProfiles EF-hand calcium-binding domain profile. 211 246 IPR002048 GO:0005509
Gma11g01177 386 Pfam Protein kinase domain 22 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01177 386 SUPERFAMILY Protein kinase-like (PK-like) 22 176 IPR011009 -
Gma11g01177 386 Pfam EF-hand domain pair 228 278 IPR002048 GO:0005509
Gma11g01177 386 ProSitePatterns EF-hand calcium-binding domain. 333 345 IPR018247 -
Gma11g01177 386 ProSiteProfiles EF-hand calcium-binding domain profile. 320 355 IPR002048 GO:0005509
Gma11g01177 386 ProSiteProfiles EF-hand calcium-binding domain profile. 247 282 IPR002048 GO:0005509
Gma11g01177 386 ProSitePatterns EF-hand calcium-binding domain. 296 308 IPR018247 -
Gma11g01177 386 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 24 18 366 - -
Gma11g01177 386 ProSiteProfiles EF-hand calcium-binding domain profile. 283 318 IPR002048 GO:0005509
Gma11g01177 386 SUPERFAMILY EF-hand 207 349 IPR011992 -
Gma11g01177 386 Gene3D - 177 352 - -
Gma11g01177 386 SMART efh_1 287 315 IPR002048 GO:0005509
Gma11g01177 386 SMART efh_1 251 279 IPR002048 GO:0005509
Gma11g01177 386 SMART efh_1 324 352 IPR002048 GO:0005509
Gma11g01177 386 SMART efh_1 215 243 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01177 Gma-Chr11 9918901 9921931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01177 17 377 EF-hand Containing Proteins AT2G31500 68.595 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma11g01177 Pkinase 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01177 K13412 - gmx:100818929 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00479 12 3899964 3904039 Gma11g01177 11 9918901 9921931 GST