Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01164 ATGGAGGTTGAGATTGATGGCTCTGTTACTGTCGAAACAGTAGGAAATACTGCTATAGGTGAGGTTAGTAGCATAGCGGATGACAACAGAGAAGGTGGAAGTTCTGTTGAACCAAATGACAACCAAGATCAACATGATAATGGGACTCAAGATTCCTCTGGAGGGATCACTATCCCATCTGCAATTCCCACAGTATCGGTTgtttcagttgaagagccctatgttggtcaggagtttgggtcagaagcagcagcacatgcattttataatgcttatgccacagaagttggatttaTCGTACGTGTGAGTAAACTCTCGCGGTCAAGGCGTGATGGAACTGCTATTGGACGTACTCTTGTTTGCAACAAAGAGGGATTCAGAATGGCTGACAAACGTGAAAAGATTGTGAGGCAAAGGGCCGAGACCAGGGTTGGTTGCAGGGCAATGATTATGGTGAGGAAACTTAGTTCTGGCAAATGGGTTGTTGCAAAGTTTGTGAAGGAACACACACATCCTTTGACCCCTGGCAAAGGTAGAAGGGATTTCTACTATGAACAATATCCGACTGAACAGGATAAAATTCGGGAACTATCTCAACAGTTGGCAACTGAGAAAAAGCGATCTGCGGCCTATAAAAGACATCTTGAATTGATATTTGAGCAAATTGAAGAGCAGAATGATAACCTTTCAAAGAAAATACAGCacatagtagactgcgtgaaggagatggaagccaaagaagaacatagtagacagtgtgaaggagatggaagccaaagaacaacagagtag 792 0.3333 MEVEIDGSVTVETVGNTAIGEVSSIADDNREGGSSVEPNDNQDQHDNGTQDSSGGITIPSAIPTVSVVSVEEPYVGQEFGSEAAAHAFYNAYATEVGFIVRVSKLSRSRRDGTAIGRTLVCNKEGFRMADKREKIVRQRAETRVGCRAMIMVRKLSSGKWVVAKFVKEHTHPLTPGKGRRDFYYEQYPTEQDKIRELSQQLATEKKRSAAYKRHLELIFEQIEEQNDNLSKKIQHIVDCVKEMEAKEEHSRQCEGDGSQRTTE 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01164 263 Coils Coil 194 232 - -
Gma11g01164 263 MobiDBLite consensus disorder prediction 19 58 - -
Gma11g01164 263 Pfam FAR1 DNA-binding domain 88 174 IPR004330 -
Gma11g01164 263 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 2 250 - -
Gma11g01164 263 MobiDBLite consensus disorder prediction 35 58 - -
Gma11g01164 263 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01164 Gma-Chr11 9798396 9801578 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma11g01164 FAR1 1.5e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01164 - - gmx:100780613 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01164 11 9798396 9801578 Gma11g01164 11 9798396 9801578 ECH
Gma12g00463 12 3791019 3792890 Gma11g01164 11 9798396 9801578 GST
Gma13g03077 13 45092669 45093151 Gma11g01164 11 9798396 9801578 PCT
Gma15g00285 15 2460294 2468475 Gma11g01164 11 9798396 9801578 PCT
Gma11g01164 11 9798396 9801578 Gma13g03077 13 45092669 45093151 PCT
Gma11g01164 11 9798396 9801578 Gma15g00285 15 2460294 2468475 PCT