Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01157 ATGGATAATAGGGACAACAAATCGCCTCCTCCTCTCCCACCTTCTTCTTCCCGTTACGTGAAATCGGAACAACAAGCTTCATTATCAGCATCGTCGTCGTTCAGCCACGACGACATAAGCGGAATGCCGGAGAATCCACCGAAGAACAGAGGGCACAGGCGCGCCCATTCGGAGATTATAACCCTACCCGACGACCTCACCTTCGACGTTGATCTCCCCGATGACAACGACTTGCTTTCCATCTACCTTCAATTCGATCAACTCGATTCCTCTCCACTTCCTCTTCCTCctccacctcaacacaacagcattgctaataataataataataataataataagaataataataataataatgaaaggcctactagggTTCGACACCAACACAGCCTCTCCATGGATGGCTCCATCCACCCGGATATGCTGCTCTCCGCTACCGCTGCCGCTGCCGATGATGTCTCCGGTGGTGGCATCGACACCAAAAAGGCTATGTCTGCTGACAAGCTTGCTGAGCTTGCCTTAGTTGATCCCAAGCGGGCTAAAAGGATATGGGCAAATAGACAGTCTGCTGCAAGATCAAAAGAAAGGAAGATGCGTTACATTTCCGAGCTTGAAAGGAAAGTGCAGACATTGCAAACTGAAGCAACTTCCTTGTCTGCACAATTGACTCTCTTGCAGCAGAGAGATACAACTGGAATGACTGCTGAGAACAGTGAGTTGAAGTTGCGGTTGCAAACCATGGAGCAACAGGTCCACTTGCAAGATGCATTAAATGATGCATTAAAAGAAGAAATTCAGCATTTGAAAGCACTGACTGGACAAGTTATGCCAAATGGAGGACCGAACACCACTCCACAGAAAGTTCATTCCATTGGTGATTGGGACTCCTCCTCCGCCTTCCCTTTGTTTCACATCGAACGTTTTTTGGGTTTAAAAGCTGGCCTTCATGGAGGACAGAAATAA 966 0.442 MDNRDNKSPPPLPPSSSRYVKSEQQASLSASSSFSHDDISGMPENPPKNRGHRRAHSEIITLPDDLTFDVDLPDDNDLLSIYLQFDQLDSSPLPLPPPPQHNSIANNNNNNNNKNNNNNNERPTRVRHQHSLSMDGSIHPDMLLSATAAAADDVSGGGIDTKKAMSADKLAELALVDPKRAKRIWANRQSAARSKERKMRYISELERKVQTLQTEATSLSAQLTLLQQRDTTGMTAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKALTGQVMPNGGPNTTPQKVHSIGDWDSSSAFPLFHIERFLGLKAGLHGGQK 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01157 321 Gene3D - 178 231 - -
Gma11g01157 321 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 13 285 - -
Gma11g01157 321 SMART brlzneu 175 240 IPR004827 GO:0003700|GO:0006355
Gma11g01157 321 CDD bZIP_plant_RF2 180 229 IPR044759 GO:0003700|GO:0006355
Gma11g01157 321 MobiDBLite consensus disorder prediction 102 120 - -
Gma11g01157 321 MobiDBLite consensus disorder prediction 17 39 - -
Gma11g01157 321 Coils Coil 245 265 - -
Gma11g01157 321 MobiDBLite consensus disorder prediction 1 54 - -
Gma11g01157 321 Pfam bZIP transcription factor 179 227 IPR004827 GO:0003700|GO:0006355
Gma11g01157 321 MobiDBLite consensus disorder prediction 90 126 - -
Gma11g01157 321 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 177 229 IPR004827 GO:0003700|GO:0006355
Gma11g01157 321 Coils Coil 195 229 - -
Gma11g01157 321 SUPERFAMILY Leucine zipper domain 179 228 IPR046347 GO:0003700|GO:0006355
Gma11g01157 321 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 13 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01157 Gma-Chr11 9758271 9766151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01157 10 280 bZIP Transcription Factor Family AT1G06070 60.616 9.06e-101 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma11g01157 bZIP_1 7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01157 - - gmx:100814674 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01157 11 9758271 9766151 Gma11g01157 11 9758271 9766151 ECH
Gma13g03084 13 45125446 45129130 Gma11g01157 11 9758271 9766151 PCT
Gma15g00277 15 2416654 2421497 Gma11g01157 11 9758271 9766151 PCT
Gma11g01157 11 9758271 9766151 Gma13g03084 13 45125446 45129130 PCT
Gma11g01157 11 9758271 9766151 Gma15g00277 15 2416654 2421497 PCT