Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01144 ATGGCCGTCAACGACGCCGATCAATCCAATAAGTCTCACAGGACTCGTCAATCTGGTGCCAAAACCAACAAGAAGAAGAAGACTAAGAAGAAGCAAAAGCAGAATCCCGATGACGCCGGAGGATTAGAGGATCCTAAGAACCGAAACCCTAAGGCATTCGCTTTCACTTCCTCCAACAAAGCCAAGCGCTTGCAATCACGCGCCGTCGAGAAAGAGCAGCGCCGCCTCCACGTTCCCGTCATCGACCGCTCCTACGACGAACCCGCTCCCTACGTCGTCGTTGTGCAGGGCCCTCCTCAGGTTGGGAAGTCACTGTTGATTAAGTCTTTGGTTAAACATTACACGAAACATAATTTGCCTGATGTGAGAGGTCCAATTACCATCGTATCAGGGAAGCAAAGGCGGGTGCAGTTTGTGGAATGTCCGAATGATATCAATGGCATGATAGATGCCGCGAAGTTTGCCGATCTAGCACTTCTTCTTATAGATGGAAGTTATGGTTTCGAAATGGAAACCTTTGAGTTCCTTAACATATTGCAAGTTCATGGGTTCCCTAAGGTCATGGGGGTTCTCACCCACCTTGATAAATTCAAGGATGCGAAGAAGTTGAGGAAAACAAAACAGCGACTCAAGCACCGGTTCTGGACTGAAATATATGATGGCGCtaaactgttttacttatcgggccttattcatggaaaGTATGTCAAGCGTGAAGTTCACAATCTTGCTCGATTTATATCAGTCATGAAGTTTCATCCTTTATCTTGGCGAACTTCTCACCCCTATGTTATGGTAGATCGTTTTGAAGACATCACTCCTCCTGAAAAAGTGCATGCAAATAATAAATGTGACAGAAAAGTCACTCTTTATGGCTATCTTAGAGGCTGCAATTTGAAAATGGGCAATAAGGTGCACATAGCAGGAGTGGGTGATTATAGTTTAGCTGTTGTTACTGCTTTACCTGATCCTTGTCCTCTTCCATCTGCCGCAAAAAAGAAAGGACTGCGTGATAAGGAAAAGTTATTCTATGCTCCCATGTCTGGCCTTGGGGATCTTTTGTACGACAAAGATGCTGTATACATAAATATTAATGATCACCTTGTTCAATTCTCAAAAGTTGATGAAAACTCTGCTATGACGAGTAAAGGAAAGGGTGGAGATATTGGGGAGGATTTGGTGAAATCGCTACAGAATATCAAATACTCAATTAATGAAAAACTAGAGAACAGCTTTATCAATATTTTTGGTCAAAAGACAAATGTGTCATCAGAAGCTCTAGGTGATGCACATGGCACAAACAAGGAAGTTGAACCAAATGGCAAAACAGAAGCTTTGGATAAATATCAGCCTGGGGCTGTTATAACTGGTGAAGATAATAACAAAATGGATTTGGATGGTTCAGAATCATCTGATCAGGATGAAGATGATGCCACAGACAGAGAACCCTCTGGTTCTGATGATGATGACAAAGATGCACCAAATAGTAATGCTAGTAATGGAGTCCATTTGCAAGAACATATTGAGTTTCATGATGGAAGACAGAGGAGAAGAGCAATATTTGGAAATGATGTTGATCAAAATGATCTGATGGATTCAGAAGGGGATGATGATGGTGATACCAGTGATGATGATGTAGAATCTTCAGAAGAGGAGGAGGAAGATGACAATGATAATGATGACACAAATGAAGATAACATGGGTAATGTTTCCAAATGGAAAGAGTCTTTGGCAGAAAGAAATCTCTCACGGAAAACTCCTAGTTTGATGCAACTTGTGTACGGGGAATCTACAATTAATTCCACCACTATAAACAGAGATAATGATAATAGTGGGGATGAGGAAAGTGATGATGACTTTTTTAAGCCCATAGAAGAAGTGAAAAAGCAAAACGTGAGAGATGGATTGAATGACGATGGGATGGTCAACACTGAGGATTGTTCCAAGTGTACACAATTTGTGGATCAGAGATGGGATGAGAATGATAATGAGGAGATTCGCAATCGATTTGTGACTGGCAATTTGGCAAAAGCTGCACTTAGAAATGCATTACCAGCAGCTAATACTGAAGAGGAAAATGATGATGTCTATGGTGACTTTGAAGATTTGGAAACAGGAGAAAAGCATGAGAATCATCAGACGGATGATGCTTTGGCTGCAACAACACACAAGGGAGATGATTTAGAAGCTGAGGAGCGGAGGCTTAAGAAACTTGCTCTTCGTGCTAAGTTTGACTCTCAATTTGATGATGACTCTGGGTCATCAGAGGAAGATACTGGTAATGAAAATGAAGACAAGTTCCGTCGTGGTCAAGCTAATGAAAGTAGCTATTTTGACAAGTTGAAAGAGGAGATTGAACTCCAGAAACAAATGAATATAGCTGAACTCAACGATCTTGATGAGGCTACCCGATTGGAGATAGAAGGCTTCCGAACAGGAACTTATCTAAGATTGGAGATTCATGATGTTCCTTGTGAGATGGTTGAATACTTTGATCCCTACCATCCAATATTGGTTGGAGGGATTGGTATAGGGGAGGAAAATGTTGGATACATGCAGGCCAGGTTAAAGCGGCACAGGTGGCACAAGAAAGTTTTGAAGACTAGAGACCCAATTATTGTATCTGTTGGATGGAGGCGTTACCAGACAACCCCAATTTATGCCATTGAGGATAGTAATGGAAGGGATCGTATGCTAAAATATACTCCAGAACACATGCATTGCCTTGCTATGTTTTGGGGCCCTCTTGCTCCTCCCAACACTGGGGTTGTAGCCTTTCAGAACTTATCAAACAATCAGGCAACATTTAGGATTACTGCAACTGCAGTTGTACTTGAGTTTAATCATGCAGCAAGGATAGTGAAGAAAATCAAATTGGTTGGTTATCCATGCAAGATATTCAAGAAGACAGCACTTATCAAGGATATGTTTACCTCAGATCTTGAAGTAGCTCGTTTTGAAGGTGCAGCTATTCGGACAGTCAGTGGGATTAGGGGGCAGGTCAAGAAGGCTGCAAAAGAAGAGATAGGTAATCAAGCGAAAAGGAAGGGTGGGCAAACCAAAGAAGGAATTGCTAGGTGCACTTTTGAAGACAAAATTCTGATGAGTGACATAGTTTTCCTGCGTGCATGGACTCAAGTTGAAGTTCCTCAGTTTTATAATCCATTGACAACAGCATTGCAGCCTCGTGACATGACCTGGAAAGGAATGAAAACTGTTGCAGAATTGAGAAGAGAGCATAATCTTGCTATTCCTGTAAATAAAGATTCACTTTACAAGAAAATTGAAAGAAAACCTAGAAAATTCAATCCAGTGGTGATTCCCAAGTCTCTACAAGCGAGTCTACCCTTTGCATCAAAACCGAAGGATATTTCCAAGCGAAAAAAGCCGTTACTTGAGGAGAGAAGGGCAAGGGGTGTTGTCATGGAACCTCGAGAGCGCAAAGTTCATACTCTTGTTCAACACCTCCAGTTAATAGATAGGGAGAAGATGAAAAAGCGAAAGCTTAAGGAAGAGAATAAGAGGAAAGCACTTGAAGCAGAGAGTGCAAAAGAAGAGCTGTTGTTGAGAAAGCGCCGGAGAGAGGAGAGAAGAGACAAATACCGGAAGGAAGACAAGCAGAATAAGAAAATTCGGAGAGCAGAGGTTTGA 3651 0.4147 MAVNDADQSNKSHRTRQSGAKTNKKKKTKKKQKQNPDDAGGLEDPKNRNPKAFAFTSSNKAKRLQSRAVEKEQRRLHVPVIDRSYDEPAPYVVVVQGPPQVGKSLLIKSLVKHYTKHNLPDVRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVMVDRFEDITPPEKVHANNKCDRKVTLYGYLRGCNLKMGNKVHIAGVGDYSLAVVTALPDPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYININDHLVQFSKVDENSAMTSKGKGGDIGEDLVKSLQNIKYSINEKLENSFINIFGQKTNVSSEALGDAHGTNKEVEPNGKTEALDKYQPGAVITGEDNNKMDLDGSESSDQDEDDATDREPSGSDDDDKDAPNSNASNGVHLQEHIEFHDGRQRRRAIFGNDVDQNDLMDSEGDDDGDTSDDDVESSEEEEEDDNDNDDTNEDNMGNVSKWKESLAERNLSRKTPSLMQLVYGESTINSTTINRDNDNSGDEESDDDFFKPIEEVKKQNVRDGLNDDGMVNTEDCSKCTQFVDQRWDENDNEEIRNRFVTGNLAKAALRNALPAANTEEENDDVYGDFEDLETGEKHENHQTDDALAATTHKGDDLEAEERRLKKLALRAKFDSQFDDDSGSSEEDTGNENEDKFRRGQANESSYFDKLKEEIELQKQMNIAELNDLDEATRLEIEGFRTGTYLRLEIHDVPCEMVEYFDPYHPILVGGIGIGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPIYAIEDSNGRDRMLKYTPEHMHCLAMFWGPLAPPNTGVVAFQNLSNNQATFRITATAVVLEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQAKRKGGQTKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDMTWKGMKTVAELRREHNLAIPVNKDSLYKKIERKPRKFNPVVIPKSLQASLPFASKPKDISKRKKPLLEERRARGVVMEPRERKVHTLVQHLQLIDREKMKKRKLKEENKRKALEAESAKEELLLRKRRREERRDKYRKEDKQNKKIRRAEV 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01144 1216 Pfam AARP2CN (NUC121) domain 239 324 IPR012948 GO:0005634|GO:0042254
Gma11g01144 1216 CDD BMS1 52 281 IPR037875 GO:0005525
Gma11g01144 1216 PANTHER BNAC08G44910D PROTEIN 482 1208 - -
Gma11g01144 1216 PANTHER BNAC08G44910D PROTEIN 1 425 - -
Gma11g01144 1216 SMART DUF663_2 719 1047 IPR007034 -
Gma11g01144 1216 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 727 1048 IPR007034 -
Gma11g01144 1216 PANTHER RIBOSOME BIOGENESIS PROTEIN 1 425 IPR039761 GO:0042254
Gma11g01144 1216 PANTHER RIBOSOME BIOGENESIS PROTEIN 482 1208 IPR039761 GO:0042254
Gma11g01144 1216 MobiDBLite consensus disorder prediction 746 773 - -
Gma11g01144 1216 MobiDBLite consensus disorder prediction 707 728 - -
Gma11g01144 1216 MobiDBLite consensus disorder prediction 17 31 - -
Gma11g01144 1216 Gene3D - 91 253 IPR027417 -
Gma11g01144 1216 MobiDBLite consensus disorder prediction 582 607 - -
Gma11g01144 1216 MobiDBLite consensus disorder prediction 505 523 - -
Gma11g01144 1216 MobiDBLite consensus disorder prediction 469 483 - -
Gma11g01144 1216 MobiDBLite consensus disorder prediction 759 773 - -
Gma11g01144 1216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 227 IPR027417 -
Gma11g01144 1216 MobiDBLite consensus disorder prediction 529 563 - -
Gma11g01144 1216 MobiDBLite consensus disorder prediction 1165 1184 - -
Gma11g01144 1216 Coils Coil 1152 1204 - -
Gma11g01144 1216 MobiDBLite consensus disorder prediction 429 621 - -
Gma11g01144 1216 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 89 253 IPR030387 -
Gma11g01144 1216 MobiDBLite consensus disorder prediction 1 71 - -
Gma11g01144 1216 SMART aarp2cn2 239 325 IPR012948 GO:0005634|GO:0042254
Gma11g01144 1216 MobiDBLite consensus disorder prediction 1189 1216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01144 Gma-Chr11 9624393 9633065 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01144 K14569 - gmx:100810906 2224.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00446 12 3635941 3644985 Gma11g01144 11 9624393 9633065 GST