Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01142 ATGACATCCTTGGTTATGCCTACCATGGCCTCCTCTCTGCTTCTCCAACTTGGTTCTACTTGTGGTAAAAGTCCCTCTTTTGCTCCTCCTCAAAGCATTTTGGTTGACAAACTTCGAAGATTAGTGATTAAAGTCAAGTCCTCAGAGACAAGGGAATGCACCACAGCTATGTTTAATGCCAATTCACGTAGAGACTTTCTTGGGTTAGCTTTAGGAGTCTCGGGTCTCTTCATCGGTTCGCTGGATGCAAATGGAGCTGGTTTGCCCCCAGAGGAAAAGCCTAAACTGTGTGATGACACTTGTGAGAAAGAGCTTGAAAATGTGCCTACGGTAACTACTGGATCAGGTTTGCAATACAAGGATATTAAAGTTGGACAAGGTCCTAGTCCACCAATTGGATTTCAGGTGGCTGCTAATTATGTTGCAATGGTTCCCTCCGGACAAATATTTGATAGTTCACTGGAGAAAGGTCAGCCTTATATTTTTCGTGTTGGTTCTGGTCAGGTGATACAAGGACTTGATGAAGGTATTCTGAGCATGAAAGTAGGAGGGAAACGTCGACTGTACATACCCGGATCACTGGCATTCCCAAAAGGCCTTACTTCTGCTCCTGGAAGACCAAGGGTGGCTCCAAGCAGTCCAGTCATATTTGATGTTAGTTTGGAATACATACCGGGGCTTGAAGTGGATGAGGAATAA 699 0.4478 MTSLVMPTMASSLLLQLGSTCGKSPSFAPPQSILVDKLRRLVIKVKSSETRECTTAMFNANSRRDFLGLALGVSGLFIGSLDANGAGLPPEEKPKLCDDTCEKELENVPTVTTGSGLQYKDIKVGQGPSPPIGFQVAANYVAMVPSGQIFDSSLEKGQPYIFRVGSGQVIQGLDEGILSMKVGGKRRLYIPGSLAFPKGLTSAPGRPRVAPSSPVIFDVSLEYIPGLEVDEE 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01142 232 Gene3D - 95 224 IPR046357 GO:0003755
Gma11g01142 232 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 32 232 - -
Gma11g01142 232 SUPERFAMILY FKBP-like 99 221 - -
Gma11g01142 232 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 133 225 IPR001179 GO:0003755
Gma11g01142 232 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 132 221 IPR001179 GO:0003755
Gma11g01142 232 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-3, CHLOROPLASTIC 32 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01142 Gma-Chr11 9611658 9615503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01142 115 221 Calmodulin-binding Proteins AT3G25230 37.037 3.46e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01142 K01802 - gmx:100818743 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01142 11 9611658 9615503 Gma11g01142 11 9611658 9615503 ECH
Gma12g00444 12 3613141 3616662 Gma11g01142 11 9611658 9615503 GST