Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01079 ATGCCCACAGCAATGACAGAGTCAGGGCCAAGTGTGAGTTTGAAGCTTCTTGCTTTAGTAGCTATTCTAGTCGTCTTCTCGCTGGTGATTCTGCTTCTGATCTTCTTCCTCTGCTTCCGAGGTAGCCGTAGCTGCAAGAAGCGGAACCTGGCCACCAAGCACAGCTCAGGTAGCATCCCTCTGGTTTCGAAGGAGATCACCATGGTCAGGGCCTCGGATCTCACCCCTGCCACCACGGCCATTGCCGTTGACGTGGACGGTGATGATCCGAAGAAGAAGGAGTCGGAGATCAAGGTTGAAATTGGTGGTGGGGGCCACCAGCGCAGCAACCAAGTGTCGGTGGAGGATCCTGATATAGGGTGGGGCCGCTGGTACAGTATTAGGGAAGTGGAGCTCGCCACGCGCGGGTTCTCGGAAGGGAATGTTATTGGGGAAGGAGGCTATGGCGTTGTCTACAGAGGTGTTCTGCACGATGCTTCCGTCGTGGCTGTCAAGAATCTTCTCAACAACAAGGGTCAAGCTGAGAAGGAGTTTAAGGTGGAGGTTGAAGCTATTGGAAAAGTAAGGCATAAGAATTTGGTTCGTTTGGTAGGATATTGTGCAGAAGGTGCTCGAAGGATGCTTGTTTATGAGTATGTTGACAACGGAAACTTGGAACAATGGCTGCATGGTGATGTAGGACCAGTTAGCCCCTTGACATGGGATATTCGAATGAGAATTGCTATTGGGACTGCAAAAGGGCTAGCCTATCTGCATGAAGGTTTAGAACCCAAAGTTGTGCACCGGGATATAAAATCCAGTAACATTCTTTTGGATAAAAACTGGAATGCCAAAGTATCAGATTTTGGACTAGCCAAGCTCTTAGGATCTGAGAAAACACACGTGACTACGCGTGTAATGGGAACATTTGGATACGTTGCACCTGAGTATGCAAGCTCGGGTATGCTTAATGAGCGCAGTGATGTATATAGCTTTGGAGTTCTTCTCATGGAGATAATCACAGGAAGAAGCCCCATTGATTATTCAAGACCACCTGGAGAGATGAATTTGGTAGATTGGTTTAAGGCAATGGTAGCAAGTCGTCGCAGTGAGGAGCTAGTTGATCCTTTAATTGAGATTCCTCCCCCTCCAAGATCTTTGAAGAGAGTTTTATTGATTTGTCTGCGCTGTATAGACATGGATGTCGTAAAGCGACCAAAGATGGGTCAAATTATTCATATGCTTGAGACAGATGATTTCCCCTTTCGTTCTGAGCTACGTTCAGTTAGAGAGAAAGATCCTGTGCCTTCTCATGCGGACGTTTCCATTAAAGTTCCTTATCCACCACCAAAGCATGCAGAAACCGTAGAAAAATCAAGATGGAGATAA 1368 0.4715 MPTAMTESGPSVSLKLLALVAILVVFSLVILLLIFFLCFRGSRSCKKRNLATKHSSGSIPLVSKEITMVRASDLTPATTAIAVDVDGDDPKKKESEIKVEIGGGGHQRSNQVSVEDPDIGWGRWYSIREVELATRGFSEGNVIGEGGYGVVYRGVLHDASVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVRLVGYCAEGARRMLVYEYVDNGNLEQWLHGDVGPVSPLTWDIRMRIAIGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKNWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVAPEYASSGMLNERSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLVDWFKAMVASRRSEELVDPLIEIPPPPRSLKRVLLICLRCIDMDVVKRPKMGQIIHMLETDDFPFRSELRSVREKDPVPSHADVSIKVPYPPPKHAETVEKSRWR 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01079 455 Gene3D Transferase(Phosphotransferase) domain 1 213 420 - -
Gma11g01079 455 ProSitePatterns Protein kinases ATP-binding region signature. 143 165 IPR017441 GO:0005524
Gma11g01079 455 MobiDBLite consensus disorder prediction 424 455 - -
Gma11g01079 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Gma11g01079 455 SUPERFAMILY Protein kinase-like (PK-like) 120 416 IPR011009 -
Gma11g01079 455 ProSiteProfiles Protein kinase domain profile. 137 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01079 455 PANTHER RECEPTOR-LIKE KINASE 5 455 - -
Gma11g01079 455 Gene3D Phosphorylase Kinase; domain 1 106 212 - -
Gma11g01079 455 Pfam Protein tyrosine and serine/threonine kinase 140 408 IPR001245 GO:0004672|GO:0006468
Gma11g01079 455 SMART serkin_6 137 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01079 455 PANTHER OS01G0323000 PROTEIN 5 455 - -
Gma11g01079 455 CDD STKc_IRAK 143 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01079 Gma-Chr11 9109946 9114315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01079 8 411 Trihelix Transcription Factor Family AT1G70460 42.651 3.20e-98 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gma11g01079 PK_Tyr_Ser-Thr 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01079 - - gmx:100305442 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01079 11 9109946 9114315 Gma11g01079 11 9109946 9114315 ECH
Gma11g01079 11 9109946 9114315 Gma12g00392 12 3200985 3204911 ECH
Gma12g00392 12 3200985 3204911 Gma11g01079 11 9109946 9114315 GST