Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01074 ATGGTCTTTTGTGCTGACTTGCAGATGACTATTGTGCCAAAGGTGCGGTTTTTTGAGGATATAGGGAAGATTAGACCAGTGGTCATTTTCTTGATGACCAAAGCTGGAGTCAGTGAGAAAGATATTGCCAAGGTTGTAGCTCTTGGACCTGAGCTGTTGGGATGCAATATAGCACATAAGCTTGACGTAAATGTAAAATACTTTTTGTGTCTTGGCATACGTCTTCGGCAATTGGGTGAGATGATTGCTGATTTCCCAATGCTGCTCAGATACAATCCAGATGTCCTTCGTCCCAACTATTCTCTTGAGGGTCGAATTATCCCAAGACATAAGGTTCTAGTGGAGAATCAGATTAATATTAAGCTAAGATACATCATGTTGACTAGCACTGACGAAGAATTCAACAAAATGGTCAAGGGCATAATTAGAAAGCGCCTCAGATTTGAATCTGCTGTCACAAATGAGGATACTACTTAG 477 0.4088 MVFCADLQMTIVPKVRFFEDIGKIRPVVIFLMTKAGVSEKDIAKVVALGPELLGCNIAHKLDVNVKYFLCLGIRLRQLGEMIADFPMLLRYNPDVLRPNYSLEGRIIPRHKVLVENQINIKLRYIMLTSTDEEFNKMVKGIIRKRLRFESAVTNEDTT 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01074 158 Pfam mTERF 27 99 IPR003690 GO:0003690|GO:0006355
Gma11g01074 158 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 99 154 - -
Gma11g01074 158 PANTHER CGI-12 PROTEIN-RELATED 23 100 IPR003690 GO:0003690|GO:0006355
Gma11g01074 158 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 23 100 - -
Gma11g01074 158 Gene3D Transcription termination factor 3, mitochondrial 22 100 IPR038538 -
Gma11g01074 158 PANTHER CGI-12 PROTEIN-RELATED 99 154 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01074 Gma-Chr11 9079462 9080822 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma11g01074 mTERF 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01074 K15032 - fve:101302328 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01074 11 9079462 9080822 Gma11g01074 11 9079462 9080822 ECH