Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01073 ATGTTTATTTCATGTCAAAAATACAACCTCTACCTTCTTTGCTCCTCTGTTCCCCTGCGCAATTCAACAACATGCAGCATTTTCAATTGTCAAAACCCAAACGAGCATCACTCCATTCTCCGCCAACCCAATTCCAAATCCACAGCATATCTTCTTCACCACCTCTCCCACAAGGATGATGGGGCACCCATCCCCATTCCCATTCCCAAACCCAGCGAGCTTCAAGACCCGATGCCCCACGAAGAAAAAGTCAAGGTTTTGGAGCTTTCCCTCGTCAGAAAAAGGAGCCCTCAGTTCCCTGGCTCCATCTACGCTCAATCTCCCAGTGACTCCGATGTGGGTTCTTCTCTGCCCCCTCTCCGCACTCTGTTTCAATCAAGTGATGGTAAAGACAACGAGGAGGAGGAAGAGGAGATGATAATGCGCGCTCTTGAGATTCGAAGGAAGGTTACTGAAGAGGTTTTTAAAGAAGCCGTGCGAAAGGGGAAGTTTGGAATCACTTACACTACCAATTTGGTTACCAGGTTATCCGGTTTCATTGATTACATCATGATTGAAGCTGCTAACTTGAAAAGATTGCCCGAATTTTCAAACTCCACCTTCAACTTACGCGCCAAAATTGTCATTGATGACTCTAAAGTTGTGCCACTTATTAGATGGTTGAAGCACAATGCAATATCATTTCCTCGGATAGCAAAGCTTATTTTGATGTCGAGAGGAAACCTTGAGGCCGTAAGGAGTTTTGTTGAGTGGTTGAAATCGGTATATGTGAAAGGAGAGTTTCTCGGTGTTGTAATGGTGAATGCTGGAGATAATATTTTCCAGCGCAGCCATGCGGAGCTGGATGAGATTGTTCTGTACTTGGAGTCCAATGGAGTCAGGAGGGATTGGATGGAATATGTCATTAGTCGTTGTCCTCAGTTATTGTCTTATAGCTTAGATGAAGTGAAGACTCGTGCACAGATCTACCATGATATGGGCTTAAATGAGAAGGATTTTGGCACAATGGTTTTTGATTTTCCTAAAGTTCTTGGTTACTATTCTATGGAAGAAATGAATGCAAAGGTTAATTACTTAAAAGAATTTGGGCTTCAAAGTAAGGATGTTGTCAGATTGATTGCATTTAGACCACAATTGATGGCGTGTAGCATTGATGAACGATGGAAGCCTCTTGTTAAGTATTTGTATTATTATGGGATCACTTGA 1206 0.4279 MFISCQKYNLYLLCSSVPLRNSTTCSIFNCQNPNEHHSILRQPNSKSTAYLLHHLSHKDDGAPIPIPIPKPSELQDPMPHEEKVKVLELSLVRKRSPQFPGSIYAQSPSDSDVGSSLPPLRTLFQSSDGKDNEEEEEEMIMRALEIRRKVTEEVFKEAVRKGKFGITYTTNLVTRLSGFIDYIMIEAANLKRLPEFSNSTFNLRAKIVIDDSKVVPLIRWLKHNAISFPRIAKLILMSRGNLEAVRSFVEWLKSVYVKGEFLGVVMVNAGDNIFQRSHAELDEIVLYLESNGVRRDWMEYVISRCPQLLSYSLDEVKTRAQIYHDMGLNEKDFGTMVFDFPKVLGYYSMEEMNAKVNYLKEFGLQSKDVVRLIAFRPQLMACSIDERWKPLVKYLYYYGIT 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01073 401 Pfam mTERF 271 400 IPR003690 GO:0003690|GO:0006355
Gma11g01073 401 SMART mt_12 299 329 IPR003690 GO:0003690|GO:0006355
Gma11g01073 401 SMART mt_12 334 365 IPR003690 GO:0003690|GO:0006355
Gma11g01073 401 SMART mt_12 370 401 IPR003690 GO:0003690|GO:0006355
Gma11g01073 401 Gene3D Transcription termination factor 3, mitochondrial 216 401 IPR038538 -
Gma11g01073 401 MobiDBLite consensus disorder prediction 100 126 - -
Gma11g01073 401 MobiDBLite consensus disorder prediction 100 135 - -
Gma11g01073 401 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 62 400 - -
Gma11g01073 401 PANTHER CGI-12 PROTEIN-RELATED 62 400 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01073 Gma-Chr11 9077644 9079428 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma11g01073 mTERF 3.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01073 K15032 - gmx:100813633 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00386 12 3170490 3174073 Gma11g01073 11 9077644 9079428 GST