Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01072 ATGGCTTCTGCAGATGTTGAGTTCCGTTGCTTTGTTGGTGGGCTTGCTTGGGTCACCGGCAACGATGCCCTCGAGAAAGCCTTTTCAATCTACGGCGACATCGTTGAATCGAAGGTTATCAACGACCGTGAGACTGGAAGGTCCAGAGGATTCGGATTTGTGACCTTCGCCTCAGAGCAGTCAATGAAAGATGCGATCGCAGGAAtgaacggccaggaccttgacggccgtaacatcactgtcaacgaagctcagacccgcgccagccgtggtggtggtggaggcggtggtttcggaagtggtggtggatacaaccgcggtagcggtggatatggtggtggtggtggcggcggcggatacggtggtcgtcgtgAAGGTGGATACAACCGTAATGGTGGGGGTGGAGGTGGAGGATACGGCGGTGGTAGAGACCGTGGTTACGGTGGTGATGGTGGTTCTCGCTACTCTCGCGGTGGGGAAGGCGGTGGATCCGATGGAAACTGGAGAAATTAG 513 0.3606 MASADVEFRCFVGGLAWVTGNDALEKAFSIYGDIVESKVINDRETGRSRGFGFVTFASEQSMKDAIAGMNGQDLDGRNITVNEAQTRASRGGGGGGGFGSGGGYNRGSGGYGGGGGGGGYGGRREGGYNRNGGGGGGGYGGGRDRGYGGDGGSRYSRGGEGGGSDGNWRN 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01072 170 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
Gma11g01072 170 PANTHER GEO13361P1-RELATED 1 170 - -
Gma11g01072 170 MobiDBLite consensus disorder prediction 124 170 - -
Gma11g01072 170 SMART rrm1_1 9 82 IPR000504 GO:0003723
Gma11g01072 170 PANTHER RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED 1 170 - -
Gma11g01072 170 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Gma11g01072 170 Gene3D - 2 121 IPR012677 -
Gma11g01072 170 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01072 Gma-Chr11 9069332 9070476 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01072 10 90 Eukaryotic Initiation Factors Gene Family AT2G23350 33.333 7.41e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01072 - K13195 gmx:100796704 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01072 11 9069332 9070476 Gma11g01072 11 9069332 9070476 ECH