Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01070 ATGGCTTCTTCAGATGTTGAGTACCGTTGCTTTGTCGGTGGGCTCGCTTGGGCCACTGACGACCAAGCTCTCGAGAGAGCCTTCTCTCAGTACGGCGAAATCGTTGAAACGAAGATTATCAACGATCGTGAGACTGGAAGATCCAGGGGTTTTGGATTTGTGACCTTCGCCTCGGAGCAGTCCATGAAAGACGCCATCGAAGGGAtgaacggccaaaaccttgacggccgtaacatcactgttaacgaagctcagtcccgtggtggcggtggcggcggaggcggtggaggtggtggatatggtggtggtcgcggtggtggatatggtggtggtggtcgcggtggtggagggggaTACAACCgtagcggtggcggtggaggctatggcggcggcggtggatatggcggtggcggtggcggtggctatggcggtggcagagaccgtggttatggtggtggtggtgaccgtggttactctcgtggtggtgacggtggtgatggAGGCTGGAGAAACTAG 516 0.2287 MASSDVEYRCFVGGLAWATDDQALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIEGMNGQNLDGRNITVNEAQSRGGGGGGGGGGGGYGGGRGGGYGGGGRGGGGGYNRSGGGGGYGGGGGYGGGGGGGYGGGRDRGYGGGGDRGYSRGGDGGDGGWRN 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01070 171 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Gma11g01070 171 PANTHER GEO13361P1-RELATED 1 171 - -
Gma11g01070 171 PANTHER RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED 1 171 - -
Gma11g01070 171 MobiDBLite consensus disorder prediction 71 107 - -
Gma11g01070 171 Gene3D - 2 108 IPR012677 -
Gma11g01070 171 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Gma11g01070 171 SMART rrm1_1 9 82 IPR000504 GO:0003723
Gma11g01070 171 MobiDBLite consensus disorder prediction 136 171 - -
Gma11g01070 171 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01070 Gma-Chr11 9056431 9057510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01070 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 35.443 7.10e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01070 - K13195 gmx:100796543 174.481