Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01048 ATGGCTTGTTCAAGTGGAACATCTTCAGGGTCATTATCTCTGCTTCAGAACTCTGGTTCTGAGGAAGATTTGCAGGCGATGATGGAAGATCAGAGAAAGAGGAAGAGAATGATATCAAACCGCGAATCTGCACGCCGATCTCGCATGAGGAAGCAGAAGCACTTGGACGATCTTGTTTCCCAAGTGGCTCAGCTCAGAAAAGAGAACCAACAAATACTCACAAGCGTCAACATCACCACGCAACAGTACTTAAGCGTTGAGGCTGAGAACTCGGTGCTTAGGGCTCAGGTGGGTGAGTTGAGTCACAGGTTGGAGTCTCTGAACGAGATCGTTGACGTGTTGAATGCCACCACCACTGTGGCGGGTTTTGGAGCAGCAGCATCGAGCACCTTCGTTGAGCCAATGAATAATAATAATAATAGCTTCTTCAACTTCAACCCGTTGAATATGGGGTATCTGAACCAGCCTATTATGGCTTCTGCAGACATATTGCAGTATTGA 501 0.4691 MACSSGTSSGSLSLLQNSGSEEDLQAMMEDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVAQLRKENQQILTSVNITTQQYLSVEAENSVLRAQVGELSHRLESLNEIVDVLNATTTVAGFGAAASSTFVEPMNNNNNSFFNFNPLNMGYLNQPIMASADILQY 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01048 166 SUPERFAMILY Leucine zipper domain 32 84 IPR046347 GO:0003700|GO:0006355
Gma11g01048 166 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 164 - -
Gma11g01048 166 Coils Coil 48 75 - -
Gma11g01048 166 CDD bZIP_plant_GBF1 33 83 IPR045314 GO:0003700|GO:0006355
Gma11g01048 166 MobiDBLite consensus disorder prediction 1 24 - -
Gma11g01048 166 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 35 50 IPR004827 GO:0003700|GO:0006355
Gma11g01048 166 MobiDBLite consensus disorder prediction 1 51 - -
Gma11g01048 166 PANTHER BZIP TRANSCRIPTION FACTOR 1 164 - -
Gma11g01048 166 Gene3D - 30 89 - -
Gma11g01048 166 MobiDBLite consensus disorder prediction 25 51 - -
Gma11g01048 166 Pfam bZIP transcription factor 31 77 IPR004827 GO:0003700|GO:0006355
Gma11g01048 166 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 30 93 IPR004827 GO:0003700|GO:0006355
Gma11g01048 166 SMART brlzneu 28 92 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01048 Gma-Chr11 8893020 8893520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01048 25 166 bZIP Transcription Factor Family AT4G34590 55.944 2.13e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma11g01048 bZIP_1 3e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01048 K25786 - gmx:547956 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01048 11 8893020 8893520 Gma11g01048 11 8893020 8893520 ECH
Gma12g00362 12 2981086 2982527 Gma11g01048 11 8893020 8893520 GST