Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01046 ATGAAGGAAAAGAGAGACTTTTCTGAGTTTCTGTCAGAGTTAATAGTCCTGGCTGATGAGGTTGCTTTGTTTTCTAAGAATCCTGAAATTGATATAGAGGATGCTTTTACTGAGTTTGCTATGTTGGTTGAGAAATTTGCTCCAATCTTCAATGATCTGAGAGACAAATGCACAATCATAGACAAGCCAGCTATCAGAAAGTCCTTGGAATCTCTTATGAATGAGCTTACCCGAGCTAAAGCTTTGATCAGAAGCTCCTCTTTGAAAGAGCGCAACAAGCGAATTGAGGACATAGCGCATGATCTCGGTCGATCATTAGGCATGCTGCTTGTGGCCAGCCTTGAAGTGTCCATAGATTTTAGAGAAAAGATTGGCACATTGCAAAAACAGCTGATGAATGCGAGATTTGGTGGGAATATGAGTCCAACTTCAAGTTCGATATCAAGATTTGTCAATGAAGCGAAGGAGGGAGGGGAAATAGAAGAGGAGATAATTGATGTTACTAGTGATGATGTTTTACTACAGCTTAAGAATGGTGATGCCGAGGAATTTGCAGTTGCACTCTTAAGGCTAAAAAAGTTCATCAGGGGTGGAAAACTGGATAGCGGTTTAATTAATGTGGAAGCTGCTGTTTCCATTCTTTTTAACCGTCCATTTTCGTCTAAGGCAGGCAATAGGTTGACAATCATTCAATTGCTAAGAAGTATTGCTATGCGAAATGATGAGATGAAGGTAAAGTCCTGCAATACTATGCAGGAGAAGATGACAAATATTGAGTTATTATCAGCAGTGGTGAAATCTCTTACAAGAGACACTGAAGAGAGGAGGGAAGCAGTGGGTCTGTTGCTAGAACTCTCTGCCCTTCCTGCAGTTAGACGGAAGATTGGGAGAATTCAGGGGTGTATTGTTATGTTAGTTTCTATCCTTAATGGAGTTGACCCTGTTTCTTCACGTGATGCAGCAAAGTTGTTGGATATACTATCAAATAATACTCAAAATGCACTTCTTATGGCCGAGGCTGGTTACTTTGGGCCGCTAGTGCAGTATTTGAATAAAGGTTGTGACATGACCAAGATTCTCATGGCAACAACACTTTCCAGGCTGGTGCTCACTGATCATAGCAAACTTACCCTTGGACAAGATGGGGCAATTGAGCCCCTTGTGAGAATGTTCAATTCTGGGAAACTTGAGTCCAAGTTATCAGCTCTAAATGCACTGCAAAATCTTTCCAGCTTGACAGAAAATGTGCGGCGTTTGATTGGAACTGGAATTGTAGGATCTCTGCTGCAACTTCTTTTCTCTGTAACATCTGTGCTCATGACTCTACGGGAGCCTGCATCAGCTATTCTTGCAAGAATTGCAGAGTCAGAAACTGTTCTTGTCAATCTAGGTGTGGCTCAGCAGATTCTCTCACTTTTGAATCTTTCCAGCCCTGTGATTCAAGGTCATCTATTAGAAGCTCTAAATAGCATTGCTTCCCTTCCTTGTGCTTCCAAAGAGAGAAGAAAAATGAAGGAAAAAGGTGCACTTCAACTAATTTTACCCCTTTTGAAGGAAACAAAAATGAAAATAAGGAGCAAGGCATTGAATTTGCTGTATACTCTCTCGGAAGATCTAACAGATGAGTCGACTGCACATTTTGATGAAACTCATCTTTTTTATATTGTTAACATTGTCTTATCATCAACATCAGATAGTGAAAAGGCTGCTGCTGTTGGCATACTGAGTAACCTTCCTGTTAGTGATAAAAAAGTGACAGATGCACTGAAGAGAGCGAATTTGTTGCCGATTTTGGTATCCATTATGGATTTAGGCACAGGAAGTAACTCACCTGCAAAAAGTATCTTAATGGAGAGTATTGCAGGCATTGCAATCCGGTTCACAAGCTCCTCTGACAAGAAACTGCAACTTCTTTCAGCAAAACATGGGGTGATTGCTTTGCTTGTAAAACTGCTCTCAAGTGGTTCAGCAATCACAAAACTCAAAGCTGCAACCGCTCTCGGTCAACTATCGCAGAATTCTCCATCTCTTAGGCGGTCTAGGAAGTCGAGGTGGTTGTGTGTTGCTCCCTCAGTGGATGCATATTGTGAAGTTCATGATGGTTATTGCTTTGTTAGCAGCACGTTTTGTCTGATCAAGGCAGGTGCTGTTTCTCCCCTTATCCAAATATTGGAAGATAAGGATTGGGAAGCAGTGGAAGCCGCTTTGAATGCCCTTTCAACTCTATTGCAAGATGAAATCTGGGAAGGTGGTGCCAATTGCATAGCCAAATTGTCAGGTGTACAAGCTATTGTAAATGTATTAGAAGCAGGTGATGTGAAGGTTCAAGAAAAAGCGCTTTGGATGTTGGAGAGAATATTCAGGGTTGAAGAACACAGAATGAAATATGGAGAATTGGCACAGGTGGTTCTTATTGAAATGGCACAGAGGAGTGATTCTACATTGAAGTCAACAGTTGCAAAAGTTTTGGCAGTGCTGGAGCTGCTACTAGTTCAATCAATAAACAAAAGAAAAAGGAAATATGAAGGACGCAGATGTGTCAAGGCAGATCCAGCAGATGATCAGGAATTCAATATTGAGAAACTGCAATTGCTAGAAGCTGAAAAAAGAAAGATCAGGCAAGAATACGAACGAAAAGCCAAACAAATTGACGTTAGAAGAAAGATTGAATACTCAACACAGCTGAATGCAGCCCGAATAAAAGTGCTTCAAGCACAAGATGACGCGATGGGTTCTATGAAGGACGCTGCTAAAAAGGGGCTTTTACGTGTCTCAAATGACAAGAAAGTATACAAGAAACTCCTCAAAGACATGATTGTTCAGGGTTTACTACGCTTGAGGGAACCATCAGTGTTATTAAGATGCAGAGAGAGTGACCGTAAGCTAGTTGAGTCATTGATAGAGGAAGCCAAAAAAGAATACTCAGAGAAAGCCAGTATGCAATCCCCTAAGATTTCCCTTGATGATCGTGTTTACCTCCCACCACCGCCTAAGAACGGCGCCGTTGATTCCCATGAACCTTATTGCTCTGGAGGAGTAGTATTGGCCTCGGAGGATGGGAAGATTGTGTTGGAAAACACCCTTGATGCACGGCTTGATGGTTTATGCTCTAAAACCCTCCCTTTTCAGGTTTATTGGGAGAGAAAAATGCTCGTATTGTTTGAAACACCCGCGGGTTTTGCCCTGTTTAAAGTGCTGGATGAAGGCAAGCTTTCTAAAGTTGAGGACTTGTGGAAGAACTTTTCCAGTGCAGATACTGCTAGACAGGTGGTCAAGTTGAAAGCATTTTCTAAATTTGAGAACACTTCAGAAGCTCTAGAGGCAGCTACTTTACTTATTGATGGAAAAGCTAGCAAGGGTCTCCGCAAGTTCCTGCGTGTTCATTGTGAAAATGAAACACTAGGTGTGGCAGATTCAAAGCTTGGGAATGTGATCAAGGAGAAATTGAAAATCGACTGTATTCACAACAATGCAGTTATGGAGTTGATGAGAGGTGTTAGAAATCAGTTAACTGAACTCATATCTGGTCTAGCTGTTCAAGACATGGCCCCAATGAGTTTGGGTTTATCTCACAGCTTATCCAGATACAAATTGAAGTTTAGTGCAGAGAAGGTGGATACCATGATTGTCCAGGCCATTGGTTTACTAGATGATCTTGATAAAGAGTTGAATACCTATGCCATGAGGGTTCGAGAATGGTATGGTTGGCATTTTCCTGAGCTTACTAAAATAATACAGGATAACATCCTATATGCCAGGGCAGTCAAGTTGATGGGTGATCGTGTTAATGCAGCTAGCCTGGATTTCTCTGAGATTTTGCCAGAGGAAGTTGAGGCAGAGCTGAAGGAGGCATCTGTGATATCTATGGGAACTGAAATTGGTGAGCTTGATTTGGCAAATATTCGAGAACTCTGTGACCAGGTTTTGTCTCTCTCGGAATACAGGGCGCAACTCTATGATTATCTGAAGAGTAGAATGAACACCATTGCACCCAATTTGACTGCAATGGTTGGGGAGCTTGTTGGTGCTCGCCTCATTGCCCATGGTGGTAGCTTATTAAATCTTGCAAAGCAGCCTGGTAGTACTGTGCAAATTCTTGGTGCTGAGAAGGCTCTCTTTAGGGCACTGAAGACTAAGCATGCTACTCCCAAGTATGGTCTTATATACCATGCTTCCTTGATTGGTCAGGCAGCTCCAAAGTTCAAGGGGAAAATTTCTCGGTCACTTGCTGCAAAGACGGCATTAGCTATTAGGTGTGATGCTCTTGGAGATGGCCAAGATAACACCATGGGATTGGAGAACAGAGCTAAGCTTGAAGCACGATTGAGGAACCTTGAAGGCAAAGAGTTGGGTCGTTTTGCTGGTTCTGCCAAGGGAAAGCCCAAGATAGAAGCATATGACAAGGACCGAAAGAAAGGAGCTGGAGGACTGATAACCCCAGCCAAGACATATAATCCTTCAGCCGATTCAGTTATCGGGCAAATGGTTGATTCTGCTATTGATGAAGATGCACAAGAGCCTTCTGTTGCTGATAAAaagaaagaaaagaaggacaagaagaaaaagaaggacaaaaagGAAGAGGATGCAACTGTGCAAGCTGATGGTGAGGAACCAGAACCTGTAGTAGTGAAAAAAGATAAGAAGAAGAAAAGGAAGGAAACTGAGAGTGCTGAGTTGCAGAATGGGAATGACGATAATGCAGGAGAGAAGAAGAAAAAGAGAAAGAAGCAGGGAGAGCAGGAAGAATCTCCTGAAATGCCAAGCAAGAAGAAAGGCAAAAAAAAGAAAAGTGAGGACTAA 4803 0.4185 MKEKRDFSEFLSELIVLADEVALFSKNPEIDIEDAFTEFAMLVEKFAPIFNDLRDKCTIIDKPAIRKSLESLMNELTRAKALIRSSSLKERNKRIEDIAHDLGRSLGMLLVASLEVSIDFREKIGTLQKQLMNARFGGNMSPTSSSISRFVNEAKEGGEIEEEIIDVTSDDVLLQLKNGDAEEFAVALLRLKKFIRGGKLDSGLINVEAAVSILFNRPFSSKAGNRLTIIQLLRSIAMRNDEMKVKSCNTMQEKMTNIELLSAVVKSLTRDTEERREAVGLLLELSALPAVRRKIGRIQGCIVMLVSILNGVDPVSSRDAAKLLDILSNNTQNALLMAEAGYFGPLVQYLNKGCDMTKILMATTLSRLVLTDHSKLTLGQDGAIEPLVRMFNSGKLESKLSALNALQNLSSLTENVRRLIGTGIVGSLLQLLFSVTSVLMTLREPASAILARIAESETVLVNLGVAQQILSLLNLSSPVIQGHLLEALNSIASLPCASKERRKMKEKGALQLILPLLKETKMKIRSKALNLLYTLSEDLTDESTAHFDETHLFYIVNIVLSSTSDSEKAAAVGILSNLPVSDKKVTDALKRANLLPILVSIMDLGTGSNSPAKSILMESIAGIAIRFTSSSDKKLQLLSAKHGVIALLVKLLSSGSAITKLKAATALGQLSQNSPSLRRSRKSRWLCVAPSVDAYCEVHDGYCFVSSTFCLIKAGAVSPLIQILEDKDWEAVEAALNALSTLLQDEIWEGGANCIAKLSGVQAIVNVLEAGDVKVQEKALWMLERIFRVEEHRMKYGELAQVVLIEMAQRSDSTLKSTVAKVLAVLELLLVQSINKRKRKYEGRRCVKADPADDQEFNIEKLQLLEAEKRKIRQEYERKAKQIDVRRKIEYSTQLNAARIKVLQAQDDAMGSMKDAAKKGLLRVSNDKKVYKKLLKDMIVQGLLRLREPSVLLRCRESDRKLVESLIEEAKKEYSEKASMQSPKISLDDRVYLPPPPKNGAVDSHEPYCSGGVVLASEDGKIVLENTLDARLDGLCSKTLPFQVYWERKMLVLFETPAGFALFKVLDEGKLSKVEDLWKNFSSADTARQVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLRVHCENETLGVADSKLGNVIKEKLKIDCIHNNAVMELMRGVRNQLTELISGLAVQDMAPMSLGLSHSLSRYKLKFSAEKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIIQDNILYARAVKLMGDRVNAASLDFSEILPEEVEAELKEASVISMGTEIGELDLANIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAPKFKGKISRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNPSADSVIGQMVDSAIDEDAQEPSVADKKKEKKDKKKKKDKKEEDATVQADGEEPEPVVVKKDKKKKRKETESAELQNGNDDNAGEKKKKRKKQGEQEESPEMPSKKKGKKKKSED 1600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01046 1600 Gene3D Nop domain 1334 1446 IPR042239 -
Gma11g01046 1600 Coils Coil 1509 1529 - -
Gma11g01046 1600 SMART NOSIC_2 1208 1260 IPR012976 -
Gma11g01046 1600 Gene3D - 850 883 - -
Gma11g01046 1600 MobiDBLite consensus disorder prediction 1456 1489 - -
Gma11g01046 1600 MobiDBLite consensus disorder prediction 1461 1475 - -
Gma11g01046 1600 Pfam NOP5NT (NUC127) domain 1051 1115 IPR012974 -
Gma11g01046 1600 ProSiteProfiles Nop domain profile. 1329 1447 IPR002687 -
Gma11g01046 1600 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 2 833 - -
Gma11g01046 1600 MobiDBLite consensus disorder prediction 1539 1600 - -
Gma11g01046 1600 SUPERFAMILY V-type ATPase subunit E-like 909 1040 - -
Gma11g01046 1600 Pfam ATP synthase (E/31 kDa) subunit 854 1041 IPR002842 GO:0033178|GO:0046961|GO:1902600
Gma11g01046 1600 SUPERFAMILY ARM repeat 151 433 IPR016024 -
Gma11g01046 1600 SMART arm_5 630 672 IPR000225 GO:0005515
Gma11g01046 1600 SMART arm_5 497 537 IPR000225 GO:0005515
Gma11g01046 1600 SMART arm_5 249 287 IPR000225 GO:0005515
Gma11g01046 1600 SMART arm_5 704 744 IPR000225 GO:0005515
Gma11g01046 1600 SMART arm_5 330 370 IPR000225 GO:0005515
Gma11g01046 1600 SMART arm_5 748 788 IPR000225 GO:0005515
Gma11g01046 1600 SMART arm_5 453 493 IPR000225 GO:0005515
Gma11g01046 1600 SMART arm_5 371 411 IPR000225 GO:0005515
Gma11g01046 1600 Gene3D - 373 685 IPR011989 -
Gma11g01046 1600 Gene3D - 913 1044 IPR038495 -
Gma11g01046 1600 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 382 424 IPR000225 GO:0005515
Gma11g01046 1600 Coils Coil 859 882 - -
Gma11g01046 1600 Pfam snoRNA binding domain, fibrillarin 1215 1443 IPR002687 -
Gma11g01046 1600 Gene3D - 701 839 IPR011989 -
Gma11g01046 1600 SUPERFAMILY ARM repeat 345 791 IPR016024 -
Gma11g01046 1600 Gene3D - 171 372 IPR011989 -
Gma11g01046 1600 Gene3D - 1178 1333 - -
Gma11g01046 1600 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN-LIKE 2 833 - -
Gma11g01046 1600 SUPERFAMILY Nop domain 1202 1446 IPR036070 -
Gma11g01046 1600 MobiDBLite consensus disorder prediction 1501 1600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01046 Gma-Chr11 8854364 8868186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01046 854 1041 Primary Pumps ATPases(2) AT3G08560 67.021 5.08e-78 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01046 K08332 - gmx:102664566 1537.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00359 12 2949737 2951568 Gma11g01046 11 8854364 8868186 GST