Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01038 ATGGGAGAAGTAGCGCGTGGTGGTTGTTGCCCTCCGATGGATCTGTTCCGTTCGGAGCCGATGCAACTGGTTCAGCTCATCATCCCCATTGAATCCGCTCACCGCACTGTCTCCTACCTCGGCGACCTTGGCCTCCTTCAGTTCAAAGATCTCAATGCAGATAAGAGTCCTTTTCAGCGGACCTATGCAGCTCAGATTAGAAGATCTGGAGAGATGGCTCGTAGATTGCGTTTTTTCAAGGAGCAAATGTTGAAAGCTGGTGTTTCACCAAAATATTCCACAACACCAGTTGATGTGAACATTGATGACCTTGAGGTTAAACTTACCGAAATTGAGTCAGAGTTAACTGAGATGAATGCAAATGGTGAAAAGTTGCAACGGTCATACAACGAGCTTGTGGAGTATAAGCTTGTTCTGCAGAAGGCTGGTGAGTTTTTCCACTCAGCTCAAAGCCGAGCCTTAGAGCAGCAGAGAGAACAGGAATCATGCCATCTGAGTGGTGAATCTATAGAAACACCTTTATTACAGGACCAAGAATTGTCTGTTGATTCATCAAAGCAAGTTAAGTTGGGCTTTTTAGCAGGTCTTGTTCCCAGGGAAAAGTCCATGGTATTTGAGAGAATTTTGTTTCGTGCTACTAGAGGAAATGTATTTTTGAGGCAGGCTACTGTTGAGGATCCCGTCACAGACCCTGTGTCTGGAGAAAAGACTGAGAAAAATGTTTTTGTGGTCTTCTATGCTGGTGAAAAAGCAAAAGCCAAGATTCTGAAAATATGTGAAGCCTTTGGTGCTAATCGTTACCCTTTTGCTGAGGAACTTGGAAAGCAAGCTCAAATGATTACAGAGGTTTCTGGAAGACTTTTAGAATTGAAGACCACTTTAGATGCTGGACTACTGCATCGGAATAACTTGCTAAATACTATTGGGGCTCAATTTGAGCAATGGGATGTTTTGGTGAGGAAGGAGAAATCTATTCATCATACCCTGAACATGCTGAGCCTTGATGTGACAAAAAAATGTCTTGTGGCTGAGGGGTGGAGTCCTGTTTTTGCAACTAAGCAGATCCAGGAAGCATTACAGCGGGCAGCATTGGACTCTAATTCTCAAGTCAATGCCATTTTCCAAGTTTTGCAAACTAGGGAGTTGCCACCTACCTATTTCCGCACAAACAAATTTACTTCTTCTTTTCAAGGAATTATTGACTCATATGGGGTTGCTAAGTATCAGGAGGCAAATCCTACTGTGTATACTGTAGTTACCTTTCCATTTCTTTTTGCTGTAATGTTTGGTGATTGGGGGCATGGAATATGTTTACTACTGGCGGCTCTATATTTCATAATCAGGGAGAAGAAACTTTCTAGTCAGAAGCTTGATGACATCACGGAGATGACTTTTGGAGGTCGTTATGTTATTTTGTTGATGGCAATATTCTCAATCTACACTGGCTTTATCTATAATGAGTTCTTTTCTGTCCCATTCGCAATCTTTGCTCCCTCTGCGTATGATTGTCGTGACCTTTCTTGCAGGGATGCTACAACAGTGGGCCTGATAAAAGTGCGTGACACTTATCCTTTCGGAGTGGATCCTGTATGGCATGGCACACGAAGTGAACTACCATTCCTAAACTCATTGAAAATGAAAATGTCAATTCTTCTTGGAGTTGCTCAAATGAACCTTGGAATTGTGATGAGCTATTTCAATGCCATATTCTTTAGAAACAGCGTAAATGTGTGGTTCCAGTTCATTCCCCAGATGATATTTCTTAACAGTCTATTTGGCTATCTATCCCTTCTTATTATTGTCAAGTGGGCCACTGGTTCTCAAGCTGATTTGTACCATATTTTGATCTACATGTTCCTGAGCCCAACAGATGATTTGGGTGAGAACCAACTCTTTGCTGGTCAGAAAAATCTGCAGCTTGTGCTTTTGCTTCTGGCTGTTATCTCTGTGCCCTGGATGCTATTGCCAAAACCTTTTATTTTGAAGAAGCAACATGAAGCTAGGCACGGGGTTGAATCCTATGCACCACTTCAAAGTACAGATGAGAGCTTGCAAGTGGAGTCAAACCATGATTCACATGGTCATGAGGAATTTGAGTTCAGCGAAGTCTTTGTACATCAACTCATACATACCATAGAATTTGTACTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAGTCTTGCTCATTCAGAGTTATCAAGTGTATTCTATGAGAAGGTTCTGATGATGGCATGGGGGTACAATAATGTTATTATCCTGATAGTGGGTCTCATTGTCTTCATTTTTGCTACCGTCGGAGTGTTACTTGTCATGGAAACTCTCAGTGCCTTTTTGCATGCGTTACGTCTTCACTGGGTGGAGTTTCAAAACAAGTTTTATGAGGGCGATGGGTACAAGTTCCACCCTTTCTCGTTCTCGTGGCTGGATGATGAGGAATGA 2457 0.4245 MGEVARGGCCPPMDLFRSEPMQLVQLIIPIESAHRTVSYLGDLGLLQFKDLNADKSPFQRTYAAQIRRSGEMARRLRFFKEQMLKAGVSPKYSTTPVDVNIDDLEVKLTEIESELTEMNANGEKLQRSYNELVEYKLVLQKAGEFFHSAQSRALEQQREQESCHLSGESIETPLLQDQELSVDSSKQVKLGFLAGLVPREKSMVFERILFRATRGNVFLRQATVEDPVTDPVSGEKTEKNVFVVFYAGEKAKAKILKICEAFGANRYPFAEELGKQAQMITEVSGRLLELKTTLDAGLLHRNNLLNTIGAQFEQWDVLVRKEKSIHHTLNMLSLDVTKKCLVAEGWSPVFATKQIQEALQRAALDSNSQVNAIFQVLQTRELPPTYFRTNKFTSSFQGIIDSYGVAKYQEANPTVYTVVTFPFLFAVMFGDWGHGICLLLAALYFIIREKKLSSQKLDDITEMTFGGRYVILLMAIFSIYTGFIYNEFFSVPFAIFAPSAYDCRDLSCRDATTVGLIKVRDTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIVMSYFNAIFFRNSVNVWFQFIPQMIFLNSLFGYLSLLIIVKWATGSQADLYHILIYMFLSPTDDLGENQLFAGQKNLQLVLLLLAVISVPWMLLPKPFILKKQHEARHGVESYAPLQSTDESLQVESNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLMMAWGYNNVIILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFSWLDDEE 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01038 818 Pfam V-type ATPase 116kDa subunit family 39 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gma11g01038 818 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 5 818 - -
Gma11g01038 818 Coils Coil 101 128 - -
Gma11g01038 818 PIRSF ATP6V0A1 11 818 IPR026028 GO:0000220|GO:0046961
Gma11g01038 818 PANTHER VACUOLAR PROTON ATPASES 5 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01038 Gma-Chr11 8798888 8809456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01038 13 818 Primary Pumps ATPases(2) AT4G39080 78.342 0.0 1317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01038 K02154 - gmx:100783125 1582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01038 11 8798888 8809456 Gma11g01038 11 8798888 8809456 ECH
Gma12g00351 12 2896349 2906732 Gma11g01038 11 8798888 8809456 GST