Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01008 ATGGGAGAAAATGAAGAAGCTACGACGACTGACATGTTGCAGAGGCTTCACTTTCTGAAGCAGCCGTTAAACATGGAGCAACTTAGCATCCCGCAATTCAACCCCTCGCAAATGCGCGCGAGGCATCATCATCAGAATCAGAACCAGTTCGACGGTGGGAACAGTAACAAGCGCGCCGGTATACCACCCTCGCACCCACACCAGATCCCGCCCATTTCGCCGTACTCTCAGATCCCATTGTCGCGTCAGCACAGCAACAGCAACAGCAACATTTCCCCTACACCCACCCACACCCGATCACTCTCGCAGCCCTCGTTTTTCTCCCTCGACTCCCTCCCTCCACTTAGCCCCTCTCCCTTCCGTGACTCCTCCTCGACTTCCGTGTCCGAAGCTGCTGACGTGTCCATGGAAGATCGCGACGTGAGTTCTCATTCCCTGTTGCCACCCTCACCTTTCTCCAGAACACTCAACACCAACAACAGTAATTTACCATTACCTCCTCGGAAAGCGCATAGACGCTCTAACAGTGATATTCCGTTTGGGTTTTCCACCGTTTTGCAATCTTCTCCGCCGCTTATCCCTCTTCGGAACCCCGTTTCAGCGAAACCTGCTCAGTTGGTGAAACGGGAAACACCGTGGGACAGGGTTGTTGAGCATAATACTAATACTAATAATAATAATAATGTAGAGGGATCCGGGGAGAAGAAATCTCCTGAAGGGGAAGTGGTGGATGATCTTTTCTCTGCTTACATGAATTTGGATAGCTTTGATGCTTTGAACTCTTCTGGAACCGATGATAAAAATGGAGGCGAAAATCGCGATGATTTGGATAGTAGAGCCAGTGGAACTAAGACCAATGGTGGAGACAGTAGTGATAATGAAGCTGAGAGTAGTGTTAATGAGAGTGGGCATGGAGGGAGTGAGAAGAGGGAAGGGATGAAGAGGAGTGCTGGGGGTGAGATTGCACCAACTACAAGGCACTATAGGAGTGTCTCCATGGATAGTTTCATTGGGAAGTTGAATTTCGGTGACGAGTCGCCGAAGCTGCCTCCTTCGCCGGGGCAGAGAGGTTGTTTGATGTCGCCTGCGGGTGGAATTGATGGGAATTCGGCGGCCTTCAGCTTGGAGTTTGGAAATGGGGAGTTTAGTGGGCCTGAATTGAAGAAAATTATGGCCAATGAAAAGCTTGCGGAGATTGCCTTGACCGATCCAAAGCGTGCGAAAAGGATTTTGGCCaaccggcaatcggctgcgcgatccaaagagcgaaagatgcggtacatttcggagctagaacacaaggttcagactctacagacagaagccaccacactatctgcacagcttactctgttacagAGAGATTCTGCTGGACTCACTAACCAGAATAGCGAGTTGAAGTTTCGCCTTCAATCTATGGAACAGCAAGCAAAGCTCCGAGATGCTCTAAATGAGGCTCTTACTGCTGAAGTTCAAAGATTAAAGATTGCTACAGCTGAACTAAGTAGCGATTCGCATGGTTCTAGCTGTTTGATTCCTCAACATTCTGTCAACCCTCTGATGTTCCAGCAGCAGCCTCCTTCTGCATCCCAACAAAACATTCATCTTCAACAGCAGCAGCACCGCCAGAATGGTAATGCCAACTCAAATTCTGACTTAAAACAATAG 1668 0.4538 MGENEEATTTDMLQRLHFLKQPLNMEQLSIPQFNPSQMRARHHHQNQNQFDGGNSNKRAGIPPSHPHQIPPISPYSQIPLSRQHSNSNSNISPTPTHTRSLSQPSFFSLDSLPPLSPSPFRDSSSTSVSEAADVSMEDRDVSSHSLLPPSPFSRTLNTNNSNLPLPPRKAHRRSNSDIPFGFSTVLQSSPPLIPLRNPVSAKPAQLVKRETPWDRVVEHNTNTNNNNNVEGSGEKKSPEGEVVDDLFSAYMNLDSFDALNSSGTDDKNGGENRDDLDSRASGTKTNGGDSSDNEAESSVNESGHGGSEKREGMKRSAGGEIAPTTRHYRSVSMDSFIGKLNFGDESPKLPPSPGQRGCLMSPAGGIDGNSAAFSLEFGNGEFSGPELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKIATAELSSDSHGSSCLIPQHSVNPLMFQQQPPSASQQNIHLQQQQHRQNGNANSNSDLKQ 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01008 555 CDD bZIP_plant_RF2 406 457 IPR044759 GO:0003700|GO:0006355
Gma11g01008 555 SMART brlzneu 401 465 IPR004827 GO:0003700|GO:0006355
Gma11g01008 555 MobiDBLite consensus disorder prediction 217 233 - -
Gma11g01008 555 Gene3D - 404 457 - -
Gma11g01008 555 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 403 466 IPR004827 GO:0003700|GO:0006355
Gma11g01008 555 Coils Coil 484 504 - -
Gma11g01008 555 MobiDBLite consensus disorder prediction 281 302 - -
Gma11g01008 555 MobiDBLite consensus disorder prediction 260 327 - -
Gma11g01008 555 Pfam bZIP transcription factor 405 463 IPR004827 GO:0003700|GO:0006355
Gma11g01008 555 SUPERFAMILY Leucine zipper domain 405 456 IPR046347 GO:0003700|GO:0006355
Gma11g01008 555 MobiDBLite consensus disorder prediction 117 132 - -
Gma11g01008 555 PANTHER ZIPPER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 73 550 - -
Gma11g01008 555 MobiDBLite consensus disorder prediction 117 172 - -
Gma11g01008 555 MobiDBLite consensus disorder prediction 524 555 - -
Gma11g01008 555 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 73 550 - -
Gma11g01008 555 Coils Coil 421 476 - -
Gma11g01008 555 MobiDBLite consensus disorder prediction 81 102 - -
Gma11g01008 555 MobiDBLite consensus disorder prediction 202 239 - -
Gma11g01008 555 MobiDBLite consensus disorder prediction 146 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01008 Gma-Chr11 8538712 8542019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01008 1 524 bZIP Transcription Factor Family AT4G38900 56.684 3.87e-175 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma11g01008 bZIP_1 2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01008 - - gmx:778145 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00323 12 2689628 2694153 Gma11g01008 11 8538712 8542019 GST