Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01001 ATGATTCAGAACGCTGATATGAGACTCGAATCAGGGACTTGTAATGTGTGCTCAGCTGCTTGTTCATCTTGCATGCATCCTAACCGAGCTCTCATGGGGTCAAAGGCTGAAGAATTCTCTGATGAAAACTGTCGCTTAGGGGAGGTTAATCAGTATTGTGATGAGAGTGATAGATCTTCTCTTGGGAGCAGAGCTTGTGAAAGGTTGAAGCATGGTGTCAGTGAAACCAGTCACAAGCCTAGTGTTTCTTCCACTCATGATTCTCTATCTGAAAATGCTGAGAACAGTCAAGCCTTATCAGAGAAGTATCAGGATTCCAAGTGTTTAGAAAGTCTTGATGATAGCACTTCTTGTATTAGTAGGACCAGTAATGCTAATTTAGCGAGCAGTTGCCATCAGATAAATACAGACAGAATAAATATATCTTGTAGTTCAACTTCAGTTAGTCACTTAGTGGCAGAAGGATCTGGAAATGGGCCAACTGTTGACATATCTAGTTTGTCAGAATGTTGTATGGAAAATGTTGATTCATCATTGACCAAAGAGAGAGTACCTATTATTGTTCCTGGTGAAAAATCTCTGGCAGATAAGGAAAACCTAAATAATGGTACAGCCAAGGTTTCAATTGAAATATGTCCAAAGTCAGAAGAAGATACTGAAAATAATGTTGATGTTGCGGAAGATGATGATCATAAATATTCAGCCCATGATGGATTGCATGAGAAGGTTGAGGAGCTGATTAAATCATCTGGAAGGGCTGAACCTCAATCAGAAGATGAGAGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTAGTAGGTGCAGTGATGGTGCAGAGCACACCTATTGCATGCGGGAAATGCTTGAGAAGGTCCCTGAAGGGGACTGGTTATGTGAAGAATGCAAGTGTGCAGAGGAGACTGCAAATCGAAAGCTAGATATTGAAGAAAAAAAAAATCACAAAGTTAGTTCAACTTCACAAATTTCTGGCAAAAGACCTTCTCAAAGCATGGAAATAGCTACAGCAGCAAAAAGGCAAGCTCTTGAATCAAGCACGGGATCACCAAAGGCATCAAGCCCTAAGAGAATAGTCCCACTGTCGCGGGAATCTTCATTCAAGAGCATGGATAAAGAAAAGATGAAATCTGGTCAACAGAAGATCCCCATGCATAACCACCTCGGTGGCGATGACACAGAACTTGCCCGTTCTCTATCAGCTGGCCCTCGGAGTCAAAATGCAAGGAGTACATTGCTGAAGTCTAATTCATTCAACAACAATTCCAAGCCAAGAGTCAAACTTGTTGATGAAGTTGTTCCCCAAAAGCAGAAAGGGGTTGTTGAACATATTTCTAAGAATATGGAGACACCTGCTGGGATGATAAGCAAATCAATGTCATTCAAATTGTCGAATTTGGGTCGTTCAAATGCTGTTGAATCAAAAGTGAAAATGATCTCTTCTAAGCCTGGAACGACACAGGATTTGAAAGCATCAAGACATGCAAAAGATTCTGCTTCATTTGACAGGAAATTTCTGTCTAAGATTGATCGACCTGTCATTTGTTCAACCATGGTTAGTTCTGTTGTTTCCACATCAAAGGGTGATCCGAAGCTTACACCACATGGCGAAACTGCTAAACCTTCTACAGTTAACAACAATAGAGAGTTTAAGGTCAACCAAGATGGAAAATTATATTCATTATCGAAGTCTATGAATAATACTAGCAGTAAAAGTCCAGAACCTCAAGTTAGTTCAGATAGAACATCAACAAGTGTCGATGAAACTCAACAGGATAAGCTGCCTCGATCACAGGATACAGCTAATCAGGTTGACAAAGCCAAAGATAGTTCCATTGATCATGTGATGTCAGGTGTTACTAATGCTTCAAAAAGCTCATTCTGTCGTAAATGTAAAGATTTTGGCCATGCTACAGAATGTTGTACAGTTAGTGGTACGCAGGAATTTGGTGCCGAATCATCAGTCATTGCCACAAGTAGTTCAAAAGAGGAGATGCATGAGGGAAATAGATTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGAAGGCCTGAAATACACAAGAGGAAAGAAGCTCCGGATCAAACTAATGAGTTTCCTACATCAAGCACTGGTTTGAAACGCGAAGTCACTTCTCAAAAGCAAGTGTTGGTTTCCAGTACATTGAAGAATAGTATATCTGCTGAAGAAAGCAATATGAAGCAGGAAATCATTGTGAATTCTACAGTTGAAACCTCCAAATGTCCATCTGCCAATGATCTGAAGCAAGTTAAATTTTGTCGAACTGATTTTTGCTCTCAGCTGAGAAAGTCAGATTCTGTTGGTCCCACTTCTGGAAAGCCTGTAGTGAGAGACTTGCCCAATAATGCCATGGAAATATCAAGTATTCTTTCAAAGATGTCAGTCATTCCAGAATATGAGTACATCTGGCAGGGTGTCTTTAAAGTGCATAGAAATGGAATGCCTCCTGACTTGTATACTGGGATTCAAGCACATTTATCTGCATGTGCTTCCCCTAAGGTTCATGAGGTAGTGAAGAAATTTTTACCTGAAGTTTCACTAAATGAAGTTTCTCGATTGAGCATATGGCCTTCACAATTTCATCAAGGTGGTGCTAAGGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACATTGAAAGTTATGAGAGGTATTACAAGGGTCTATTGGATCACATGATTAGAAATGATTTAGCACTTAGGGGGACTTCTGATGGTGTTGAACTTCTTATATTTGCATCTAATCAGCTTCCAGAAGATTCACAACGTTGGAATATGTTATTTTTCCTATGGGGTATATTTAGGGGGAGGAGGATCAATCACTTAGATTCCACAAAAAAGATATGTATTCCCAGTTTGAATGTGATGCCAAATGAGAAAGATTTTCCAACAGCTGTCATGACTTTGTCTGAAACTCGGTGTTCACCTAAGCGCATGGATGAAGAGTTCATTGACCAAGATCACAATATGGTAAGTAGGAATTTTGATGGCAAAGAAACTATTTTTGACCAGACACATTTGGGTTTACTAGTAAACTTAGAGAGACAAGACGCTAGAATCAACACCAAATCTACATCAGGGATTCCAACCATCAGGACACAATTGTGTCAACAAATGAATTCCACTGGTTCGTCCCTGAGAGATAGTGTTCCAGAGCATCGACAATACATAGAGTCTAAACCTCCTGAAGCAATGGAAACTAGTGTAAGTAGTAGGATTGTGGAAACAAAAACTAATCATGATATTTCTGTTAAGCAAGAGAACTCTTTGTCTTCGGGGATCCCTTCGGTTGGTTACCAAGAGATAGATACTGCAAGCAATATCAATAGGGATAAAATTTTGGACAGAACAAACAATGATGAGAATCAGCAAAGGCCTAAAAGGAAACAGATGGAAGATGATCTTGATATTAACGTTGAGGCAACGTTTCTGGGAGACCTGACTGTGAAAGCGGTCAACTGTCAACTACCTAATGATAAAAAAGTTAAGCATATAGATCTTTCAGATACAGCTGTGGAAGCTTCTGCAGTTAGTTGTCAGAAAATGCCTTGGAATGAGGTAAATGGAAAATTTGAAAACGGAGAAAGTTATAGCAAGAAGCTGCAAACAGGTTTTGGTGGAATTCACGGATGTTATGATTCTGGAGCCAGGGAATCTTTTAATGGTAGTTTTGCGTCACTTGTAAATGATCTTGGTTCCTGTTCTTCAGGGGAGAACAAACGGTGCAAAAAACCTTGTGATGAGAAAATCATCCACGAGGACTTAGGAGCGATGGAAAGAACCTTCTTTCCTGTTGATACTCGTAAAAAAAAAGACTCGGGGATGGTACTGAATGAGCCTCCTCGTGCATACGTGGACCAATTTCAAGTTGGAATTCCAAATCTAGAGCTTGGTTTGGGGGGTGAAACGAAACCGTCACACAAGGGTATGCTGCCTTTCTTTGTTGGTGCGGTTGACAAGAAAAATAGCCAGGAAAAGACTCCAGATATATTGACAGATGAGCGAGAGGATGAGAATGTTGCTGCGTCTCTTTCCCTGTCTCTATCTTTTCCATCTTCAAACAAGGAACACGTCAAACCTGTTACAAAAGCTGAGGATGGGCATAATGTGAATTCGCCGTATCTCCTTTTTGGGAGATTCACGGACAAATAA 4239 0.4022 MIQNADMRLESGTCNVCSAACSSCMHPNRALMGSKAEEFSDENCRLGEVNQYCDESDRSSLGSRACERLKHGVSETSHKPSVSSTHDSLSENAENSQALSEKYQDSKCLESLDDSTSCISRTSNANLASSCHQINTDRINISCSSTSVSHLVAEGSGNGPTVDISSLSECCMENVDSSLTKERVPIIVPGEKSLADKENLNNGTAKVSIEICPKSEEDTENNVDVAEDDDHKYSAHDGLHEKVEELIKSSGRAEPQSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKCAEETANRKLDIEEKKNHKVSSTSQISGKRPSQSMEIATAAKRQALESSTGSPKASSPKRIVPLSRESSFKSMDKEKMKSGQQKIPMHNHLGGDDTELARSLSAGPRSQNARSTLLKSNSFNNNSKPRVKLVDEVVPQKQKGVVEHISKNMETPAGMISKSMSFKLSNLGRSNAVESKVKMISSKPGTTQDLKASRHAKDSASFDRKFLSKIDRPVICSTMVSSVVSTSKGDPKLTPHGETAKPSTVNNNREFKVNQDGKLYSLSKSMNNTSSKSPEPQVSSDRTSTSVDETQQDKLPRSQDTANQVDKAKDSSIDHVMSGVTNASKSSFCRKCKDFGHATECCTVSGTQEFGAESSVIATSSSKEEMHEGNRLKAAIQAALLRRPEIHKRKEAPDQTNEFPTSSTGLKREVTSQKQVLVSSTLKNSISAEESNMKQEIIVNSTVETSKCPSANDLKQVKFCRTDFCSQLRKSDSVGPTSGKPVVRDLPNNAMEISSILSKMSVIPEYEYIWQGVFKVHRNGMPPDLYTGIQAHLSACASPKVHEVVKKFLPEVSLNEVSRLSIWPSQFHQGGAKEDNIALYFFAKDIESYERYYKGLLDHMIRNDLALRGTSDGVELLIFASNQLPEDSQRWNMLFFLWGIFRGRRINHLDSTKKICIPSLNVMPNEKDFPTAVMTLSETRCSPKRMDEEFIDQDHNMVSRNFDGKETIFDQTHLGLLVNLERQDARINTKSTSGIPTIRTQLCQQMNSTGSSLRDSVPEHRQYIESKPPEAMETSVSSRIVETKTNHDISVKQENSLSSGIPSVGYQEIDTASNINRDKILDRTNNDENQQRPKRKQMEDDLDINVEATFLGDLTVKAVNCQLPNDKKVKHIDLSDTAVEASAVSCQKMPWNEVNGKFENGESYSKKLQTGFGGIHGCYDSGARESFNGSFASLVNDLGSCSSGENKRCKKPCDEKIIHEDLGAMERTFFPVDTRKKKDSGMVLNEPPRAYVDQFQVGIPNLELGLGGETKPSHKGMLPFFVGAVDKKNSQEKTPDILTDEREDENVAASLSLSLSFPSSNKEHVKPVTKAEDGHNVNSPYLLFGRFTDK 1412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01001 1412 MobiDBLite consensus disorder prediction 544 635 - -
Gma11g01001 1412 MobiDBLite consensus disorder prediction 71 96 - -
Gma11g01001 1412 PANTHER - 1166 1402 - -
Gma11g01001 1412 PANTHER - 7 1165 - -
Gma11g01001 1412 MobiDBLite consensus disorder prediction 341 376 - -
Gma11g01001 1412 SMART PHD_3 273 320 IPR001965 -
Gma11g01001 1412 MobiDBLite consensus disorder prediction 1139 1161 - -
Gma11g01001 1412 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 205 335 IPR013083 -
Gma11g01001 1412 ProSiteProfiles Zinc finger PHD-type profile. 271 322 IPR019787 -
Gma11g01001 1412 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 7 1165 - -
Gma11g01001 1412 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1166 1402 - -
Gma11g01001 1412 MobiDBLite consensus disorder prediction 561 624 - -
Gma11g01001 1412 MobiDBLite consensus disorder prediction 333 409 - -
Gma11g01001 1412 MobiDBLite consensus disorder prediction 389 403 - -
Gma11g01001 1412 SUPERFAMILY FYVE/PHD zinc finger 260 325 IPR011011 -
Gma11g01001 1412 MobiDBLite consensus disorder prediction 76 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01001 Gma-Chr11 8494631 8502753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01001 270 331 C2H2 Transcription Factor Family AT3G01460 35.484 8.43e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01001 - - gmx:100784908 2776.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00142 12 1091413 1100769 Gma11g01001 11 8494631 8502753 GST