Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01000 ATGTATTATGTAAAAGAAGCTGCGCATGTCGACCCCATGTTCGTAGCTGATAACACCAACCCCAAGGATTATTACAAAGTGCTGGAGGTTGAATATGATGCAACCGATGAAAATATCAAATTAAATTACCGAAGACTCGCGCTGAAATGGCATCCTGACAAGCACGGAGGAGATAGTGCTGTTACTGCAAAATTTCAAGAGATAAATGAAGCTTACAATGTATTAAGTGATCCTACCAAGCGTTTGGACTATGATTTAACTGGGATATGCGAGATTGAAAAATATAGCTTGCAGGAGTATCTTGCCAGATTTAAAAGCATGATTCTTACCTGCAATGGACTTGGTATCAATCAGACAGACAGATGGTCTCAGCAATTGATTGAAAATTTTGAGTCCCTAGATAAATAA 408 0.3848 MYYVKEAAHVDPMFVADNTNPKDYYKVLEVEYDATDENIKLNYRRLALKWHPDKHGGDSAVTAKFQEINEAYNVLSDPTKRLDYDLTGICEIEKYSLQEYLARFKSMILTCNGLGINQTDRWSQQLIENFESLDK 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01000 135 ProSitePatterns Nt-dnaJ domain signature. 65 84 IPR018253 -
Gma11g01000 135 SMART dnaj_3 22 80 IPR001623 -
Gma11g01000 135 PANTHER DNAJ PROTEIN-LIKE 16 127 - -
Gma11g01000 135 SUPERFAMILY Chaperone J-domain 20 109 IPR036869 -
Gma11g01000 135 Pfam DnaJ domain 23 85 IPR001623 -
Gma11g01000 135 ProSiteProfiles dnaJ domain profile. 23 88 IPR001623 -
Gma11g01000 135 PRINTS DnaJ domain signature 25 43 IPR001623 -
Gma11g01000 135 PRINTS DnaJ domain signature 43 58 IPR001623 -
Gma11g01000 135 PRINTS DnaJ domain signature 60 80 IPR001623 -
Gma11g01000 135 PRINTS DnaJ domain signature 80 99 IPR001623 -
Gma11g01000 135 CDD DnaJ 23 77 IPR001623 -
Gma11g01000 135 Gene3D DnaJ domain 11 101 IPR036869 -
Gma11g01000 135 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 16 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01000 Gma-Chr11 8484861 8488833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01000 13 85 C2H2 Transcription Factor Family AT1G74250 39.744 1.01e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01000 - - gmx:100527491 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00146 12 1122017 1124965 Gma11g01000 11 8484861 8488833 GST