LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma11g00983	ATGACAGTTGAAAAGAGAATTGTTTTGGTGGGGATTAGAATTGATGGCTATAGCAGACAGCTCCTCAACTGGGCTCTTGTCAAAGTTGCTGAGCCTGGTGATTGTGTTATAGCAGTTCATGTGGTTAAAAATTCAGATTATGTTTCCAAAAACAAGACTCTGATAGATGGCTATTTAGAAGTTTATGATGGCCTATGTGGTGTGAAGAAGGTAGGTCTCACTGGTCAAATCTTCACAGGAAGCTCCATTAAAAACATTCTTGTCAGAGAAGCAAAAAAACATGCTGCTCTGGCTCTAGTGGTAGGGGGACGAGCTGCCACAGCTAAATATTGTGCTAAACGGCTACCACCGACCACCAATGTTCTAGCCATTCAAGACTCAAGAATTCTCTTCAGAAGTTGCACCAATAAACAACTACCAGGTGGTCTTATACTGGATCCAAGACCTAGTTTAACAATCATCGAAGAAAACTTGAGTGACAGAATAATCCAGTCTGCAATTTGTGACTCCATCATGGAGATTGAGGAATCAACACCCATAAAAAATTCCTTAGAATTGAAGGATGAAGAGAAGAGCAAGTCAACAAGGTCAATATCAGTTGAGCAGAAGCTTGGGTGGCCTCTACTCCGCAGAGCCAATTCAGGAATGTCACAAACCCTTCTTCATACAAGGGACATGTCAGTAGTACAATGGGTAATGACCTTACCAGATCGTTCACCACATAATAAAAGTTCTAGCTCTTCTTCCACTGAGGAAAATCCATTTGAAAGGAGGAGCATCAGCGATATTGAATATGAGAGCTCTACAAATTCTTCTCCTGCATCTGTTGATATAATACCAAATGGCCTAGAGGAGATATTAAATTTAAATTCTCTCGATTGCAAGCGATTCAGCCTTGAGGTTCTCAAGTCTTGCACTAGCCAATTCTCTTCAGAAAACTTGGTTGGGAAAGGAGGGAGCAATCGTGTGTACAAAGGAGTCCTCCCTGATGGAAAGGCAATCGCAGTTAAAGTAATGCAGTCATCAAAAGAAGCCTGGAAAGATTTTGCCCTTGAGGTGGAAATAATATCCTCAGTGGAGCACAAAAGCATTGCCCCTCTACTTGGAATTTGCATAGAGAACAATTCTTTAATATCTGTTTACGATTATTTCCCCAAAGGCAGCTTAGAGGAAAATCTGCATGGTAAAGATGAATCCATCTTGTCATGGGAAGTGAGATTTAATGTGGCTCTTAGGATCGCTGAAGCCCTCGATTACCTACACAGAGAAGCTTTGAAGCCTGTTGTTATACATAAAGATGTCAAGTCTTCTAACATTCTTCTCTCCCAAGGGTTTGAACCTCAGTTGTCTGATTTCGGACTAGCAGTATGGGGTCCAACAACTTCATCCTTTTTGACCCAAGATGTAGTAGGAACATTTGGTTATCTTGCTCCTGAATACTTCATGTATGGAAAGGTCAGTGACAAGATAGATGTCTATGCCTTCGGTGTAGTTCTACTTGAGCTAATATCAGGAAGGGAACCAATCAGCTCAGCAGCTTTCAAAGGACAGGAGAGCTTGGTCGTGTGGGCGAAACCAATAATGGAGAGTGGGAATGTTAAGGGCTTATTGGACCCAAATTTAGAAGGGAAATTTGTTGAGGCCCAATTGCAAAGAATGGTTCTAGCAGCATCTTTATGCATCACACGGGCGGCTAGACTTCGTCCTAAACTGAACCAGATATTGAAGATCCTAAAAGGAGATGAGAGAGTTGAATGTTTCTTAAACTCTCAAGGGGATGGTGATCAGGAGGATTCAGAAAATCAAGAAAACATTGATGACGAAGTGTACCCAAATTCAAGTGCAGAGTTGCACCTAAGTCTTGCATTACTTGGTGTTGACGATGACAGTACATCACATAGTAGTACAGACCACAGCTATAGTGAACACTTGAAAGAACAATGGAGCAGGTCATCAAGTTTTAATTAG	1968	0.4146	MTVEKRIVLVGIRIDGYSRQLLNWALVKVAEPGDCVIAVHVVKNSDYVSKNKTLIDGYLEVYDGLCGVKKVGLTGQIFTGSSIKNILVREAKKHAALALVVGGRAATAKYCAKRLPPTTNVLAIQDSRILFRSCTNKQLPGGLILDPRPSLTIIEENLSDRIIQSAICDSIMEIEESTPIKNSLELKDEEKSKSTRSISVEQKLGWPLLRRANSGMSQTLLHTRDMSVVQWVMTLPDRSPHNKSSSSSSTEENPFERRSISDIEYESSTNSSPASVDIIPNGLEEILNLNSLDCKRFSLEVLKSCTSQFSSENLVGKGGSNRVYKGVLPDGKAIAVKVMQSSKEAWKDFALEVEIISSVEHKSIAPLLGICIENNSLISVYDYFPKGSLEENLHGKDESILSWEVRFNVALRIAEALDYLHREALKPVVIHKDVKSSNILLSQGFEPQLSDFGLAVWGPTTSSFLTQDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPISSAAFKGQESLVVWAKPIMESGNVKGLLDPNLEGKFVEAQLQRMVLAASLCITRAARLRPKLNQILKILKGDERVECFLNSQGDGDQEDSENQENIDDEVYPNSSAELHLSLALLGVDDDSTSHSSTDHSYSEHLKEQWSRSSSFN	655

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma11g00983	655	Gene3D	Phosphorylase Kinase; domain 1	281	383	-	-
Gma11g00983	655	Pfam	Protein kinase domain	311	513	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gma11g00983	655	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK7 ISOFORM X1	3	636	-	-
Gma11g00983	655	MobiDBLite	consensus disorder prediction	628	655	-	-
Gma11g00983	655	SMART	serkin_6	309	577	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gma11g00983	655	ProSiteProfiles	Protein kinase domain profile.	309	588	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gma11g00983	655	MobiDBLite	consensus disorder prediction	237	257	-	-
Gma11g00983	655	MobiDBLite	consensus disorder prediction	237	254	-	-
Gma11g00983	655	MobiDBLite	consensus disorder prediction	631	645	-	-
Gma11g00983	655	PANTHER	OS08G0249100 PROTEIN	3	636	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma11g00983	Gma-Chr11	8361649	8365057	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma11g00983	296	654	Trihelix Transcription Factor Family	AT1G70460	38.814	1.28e-74	252

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VI	Gma11g00983		Pkinase	5.7e-39	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma11g00983	-		-	gmx:100780623	1256.51

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma12g00310	12	2516327	2519945	Gma11g00983	11	8361649	8365057	GST

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