Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00983 ATGACAGTTGAAAAGAGAATTGTTTTGGTGGGGATTAGAATTGATGGCTATAGCAGACAGCTCCTCAACTGGGCTCTTGTCAAAGTTGCTGAGCCTGGTGATTGTGTTATAGCAGTTCATGTGGTTAAAAATTCAGATTATGTTTCCAAAAACAAGACTCTGATAGATGGCTATTTAGAAGTTTATGATGGCCTATGTGGTGTGAAGAAGGTAGGTCTCACTGGTCAAATCTTCACAGGAAGCTCCATTAAAAACATTCTTGTCAGAGAAGCAAAAAAACATGCTGCTCTGGCTCTAGTGGTAGGGGGACGAGCTGCCACAGCTAAATATTGTGCTAAACGGCTACCACCGACCACCAATGTTCTAGCCATTCAAGACTCAAGAATTCTCTTCAGAAGTTGCACCAATAAACAACTACCAGGTGGTCTTATACTGGATCCAAGACCTAGTTTAACAATCATCGAAGAAAACTTGAGTGACAGAATAATCCAGTCTGCAATTTGTGACTCCATCATGGAGATTGAGGAATCAACACCCATAAAAAATTCCTTAGAATTGAAGGATGAAGAGAAGAGCAAGTCAACAAGGTCAATATCAGTTGAGCAGAAGCTTGGGTGGCCTCTACTCCGCAGAGCCAATTCAGGAATGTCACAAACCCTTCTTCATACAAGGGACATGTCAGTAGTACAATGGGTAATGACCTTACCAGATCGTTCACCACATAATAAAAGTTCTAGCTCTTCTTCCACTGAGGAAAATCCATTTGAAAGGAGGAGCATCAGCGATATTGAATATGAGAGCTCTACAAATTCTTCTCCTGCATCTGTTGATATAATACCAAATGGCCTAGAGGAGATATTAAATTTAAATTCTCTCGATTGCAAGCGATTCAGCCTTGAGGTTCTCAAGTCTTGCACTAGCCAATTCTCTTCAGAAAACTTGGTTGGGAAAGGAGGGAGCAATCGTGTGTACAAAGGAGTCCTCCCTGATGGAAAGGCAATCGCAGTTAAAGTAATGCAGTCATCAAAAGAAGCCTGGAAAGATTTTGCCCTTGAGGTGGAAATAATATCCTCAGTGGAGCACAAAAGCATTGCCCCTCTACTTGGAATTTGCATAGAGAACAATTCTTTAATATCTGTTTACGATTATTTCCCCAAAGGCAGCTTAGAGGAAAATCTGCATGGTAAAGATGAATCCATCTTGTCATGGGAAGTGAGATTTAATGTGGCTCTTAGGATCGCTGAAGCCCTCGATTACCTACACAGAGAAGCTTTGAAGCCTGTTGTTATACATAAAGATGTCAAGTCTTCTAACATTCTTCTCTCCCAAGGGTTTGAACCTCAGTTGTCTGATTTCGGACTAGCAGTATGGGGTCCAACAACTTCATCCTTTTTGACCCAAGATGTAGTAGGAACATTTGGTTATCTTGCTCCTGAATACTTCATGTATGGAAAGGTCAGTGACAAGATAGATGTCTATGCCTTCGGTGTAGTTCTACTTGAGCTAATATCAGGAAGGGAACCAATCAGCTCAGCAGCTTTCAAAGGACAGGAGAGCTTGGTCGTGTGGGCGAAACCAATAATGGAGAGTGGGAATGTTAAGGGCTTATTGGACCCAAATTTAGAAGGGAAATTTGTTGAGGCCCAATTGCAAAGAATGGTTCTAGCAGCATCTTTATGCATCACACGGGCGGCTAGACTTCGTCCTAAACTGAACCAGATATTGAAGATCCTAAAAGGAGATGAGAGAGTTGAATGTTTCTTAAACTCTCAAGGGGATGGTGATCAGGAGGATTCAGAAAATCAAGAAAACATTGATGACGAAGTGTACCCAAATTCAAGTGCAGAGTTGCACCTAAGTCTTGCATTACTTGGTGTTGACGATGACAGTACATCACATAGTAGTACAGACCACAGCTATAGTGAACACTTGAAAGAACAATGGAGCAGGTCATCAAGTTTTAATTAG 1968 0.4146 MTVEKRIVLVGIRIDGYSRQLLNWALVKVAEPGDCVIAVHVVKNSDYVSKNKTLIDGYLEVYDGLCGVKKVGLTGQIFTGSSIKNILVREAKKHAALALVVGGRAATAKYCAKRLPPTTNVLAIQDSRILFRSCTNKQLPGGLILDPRPSLTIIEENLSDRIIQSAICDSIMEIEESTPIKNSLELKDEEKSKSTRSISVEQKLGWPLLRRANSGMSQTLLHTRDMSVVQWVMTLPDRSPHNKSSSSSSTEENPFERRSISDIEYESSTNSSPASVDIIPNGLEEILNLNSLDCKRFSLEVLKSCTSQFSSENLVGKGGSNRVYKGVLPDGKAIAVKVMQSSKEAWKDFALEVEIISSVEHKSIAPLLGICIENNSLISVYDYFPKGSLEENLHGKDESILSWEVRFNVALRIAEALDYLHREALKPVVIHKDVKSSNILLSQGFEPQLSDFGLAVWGPTTSSFLTQDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPISSAAFKGQESLVVWAKPIMESGNVKGLLDPNLEGKFVEAQLQRMVLAASLCITRAARLRPKLNQILKILKGDERVECFLNSQGDGDQEDSENQENIDDEVYPNSSAELHLSLALLGVDDDSTSHSSTDHSYSEHLKEQWSRSSSFN 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00983 655 Gene3D Phosphorylase Kinase; domain 1 281 383 - -
Gma11g00983 655 Pfam Protein kinase domain 311 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00983 655 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK7 ISOFORM X1 3 636 - -
Gma11g00983 655 MobiDBLite consensus disorder prediction 628 655 - -
Gma11g00983 655 SMART serkin_6 309 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00983 655 ProSiteProfiles Protein kinase domain profile. 309 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00983 655 MobiDBLite consensus disorder prediction 237 257 - -
Gma11g00983 655 MobiDBLite consensus disorder prediction 237 254 - -
Gma11g00983 655 MobiDBLite consensus disorder prediction 631 645 - -
Gma11g00983 655 PANTHER OS08G0249100 PROTEIN 3 636 - -
Gma11g00983 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Gma11g00983 655 SUPERFAMILY Protein kinase-like (PK-like) 292 578 IPR011009 -
Gma11g00983 655 Gene3D Transferase(Phosphotransferase) domain 1 384 591 - -
Gma11g00983 655 CDD USP_Like 8 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00983 Gma-Chr11 8361649 8365057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00983 296 654 Trihelix Transcription Factor Family AT1G70460 38.814 1.28e-74 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma11g00983 Pkinase 5.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00983 - - gmx:100780623 1256.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00310 12 2516327 2519945 Gma11g00983 11 8361649 8365057 GST