Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00976 ATGGGAAGGTCCCCTTGCTGTGAGAAAGCTCACACAAACAAAGGTGCATGGACTAAAGAAGAAGATGACAGACTCATATCTTATATTCGAGCTCACGGCGAAGGCTGCTGGCGTTCACTCCCCAAAGCCGCCGGTCTTCTCCGGTGCGGCAAAAGCTGCCGTCTCCGGTGGATCAACTACCTCCGCCCCGACCTTAAAAGAGGTAACTTTACCGAAGAAGAAGACGAGCTCATCATCAAACTCCACAGTCTCCTCGGTAACAAgtggtctttgatagctggaagattgccggggagaacagacaatgaaataaagaactattggaatacGCACATAAGAAGGAAGCTTTTGAACAGAGGAATCGACCCTGCAACTCATAGGCCACTCAACGAAGCTGCAACTGCTGCAACTGTTACAACTAATATATCTTTTGGCAAACAAGAACAACAAGAGACAAGTTCGAGTAACGGAAGCGTTGTTAAAGGTTCCATCTTGGAACGCTGCCCTGACTTGAACCTTGAGTTAACCATTAGTCCTCCTCGCCAACAACAACAGACTCAGAAGAATCTTTGTTTCGTTTGCAGTTTGGGTTTGCACAACAGCAAAGATTGCAGCTGCAACGTTTCCAACGCTGTCACTGTCAACAACACCACTCCTTCTTCTGCTGCTGCTGCTGCTTATGATTTCTTGGGCATGAAAACCAGCGGTGTTTGGGATTGCACCCGCTTGGAAATGAAATGA 741 0.4359 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDPATHRPLNEAATAATVTTNISFGKQEQQETSSSNGSVVKGSILERCPDLNLELTISPPRQQQQTQKNLCFVCSLGLHNSKDCSCNVSNAVTVNNTTPSSAAAAAYDFLGMKTSGVWDCTRLEMK 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00976 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gma11g00976 246 CDD SANT 69 112 IPR001005 -
Gma11g00976 246 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Gma11g00976 246 Gene3D - 14 66 - -
Gma11g00976 246 CDD SANT 16 61 IPR001005 -
Gma11g00976 246 PANTHER TRANSCRIPTION REPRESSOR MYB4 1 211 - -
Gma11g00976 246 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 211 - -
Gma11g00976 246 SMART sant 66 114 IPR001005 -
Gma11g00976 246 SMART sant 13 63 IPR001005 -
Gma11g00976 246 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gma11g00976 246 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Gma11g00976 246 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gma11g00976 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gma11g00976 246 Gene3D - 68 140 - -
Gma11g00976 246 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00976 Gma-Chr11 8293135 8294004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00976 1 246 MYB Transcription Factor Family AT4G38620 58.865 1.08e-108 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma11g00976 Myb_DNA-binding 1.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00976 K09422 - gmx:780553 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00303 12 2443087 2444532 Gma11g00976 11 8293135 8294004 GST