Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00969 ATGCGTAGAGCGATCGCGTTTCTCGTTCACCCACGATTCCTCCTTCTCTTCCTTGTTCTCTCAATTTTCCTCATTTTCACATTTTCTGGTTCTACCACCACCAATGGTTTTACTAATCCCAAACAGGTTGTTGAGATCATTGAGGAGAAACCAGAAGAGGAGCCAGAAATTACACACAGAGTATTTTTGGATATTGATATTGATAAACAGCGTTTAGGTAGGATAGTGATTGGATTATATGGCCAAGTTGTACCGAAAACTGTGGAAAATTTTAGAGCTTTGTGTACAGGGGAGAAAGGAAAGAGTGAAAATGGCATAAAGCTTCATTACAAAGGAACACCATTTCATCGGATAATATCTGGTTTTGTGATTCAGGGTGGAGACATTGTTCATCATGATGGTAAAGGGTCTGAATCTATTTTTGGTGGCACCTTTCCTGATGAGAATTTCAAGATTAAACATTCTCATGCCGGAGTTGTTTCTATGGCAAATTCAGGACCTGATTCCAATGGCTCACAGTTTTTCCTTACCACAGTGAAGGCCAGATGGTTGGATGGAGAGCATGTTGTCTTTGGCAAGGTTGTTCAAGGCATGGATATTGTGTATGTAATTGAAGGGGGAGCCGGAACTTACAGTGGAAAACCCAGAAAGAAGGTGGTGATAGCAGACTCTGGGGAGATACCAAAGATCCACTGGGATGAGGAAACTTGA 711 0.4163 MRRAIAFLVHPRFLLLFLVLSIFLIFTFSGSTTTNGFTNPKQVVEIIEEKPEEEPEITHRVFLDIDIDKQRLGRIVIGLYGQVVPKTVENFRALCTGEKGKSENGIKLHYKGTPFHRIISGFVIQGGDIVHHDGKGSESIFGGTFPDENFKIKHSHAGVVSMANSGPDSNGSQFFLTTVKARWLDGEHVVFGKVVQGMDIVYVIEGGAGTYSGKPRKKVVIADSGEIPKIHWDEET 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00969 236 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 110 127 IPR020892 GO:0003755|GO:0006457
Gma11g00969 236 SUPERFAMILY Cyclophilin-like 56 227 IPR029000 -
Gma11g00969 236 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 25 236 - -
Gma11g00969 236 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 65 224 IPR002130 GO:0000413|GO:0003755
Gma11g00969 236 Gene3D - 46 231 IPR029000 -
Gma11g00969 236 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 25 236 - -
Gma11g00969 236 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 62 226 IPR002130 GO:0000413|GO:0003755
Gma11g00969 236 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 79 94 IPR002130 GO:0000413|GO:0003755
Gma11g00969 236 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 115 127 IPR002130 GO:0000413|GO:0003755
Gma11g00969 236 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 158 173 IPR002130 GO:0000413|GO:0003755
Gma11g00969 236 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 185 IPR002130 GO:0000413|GO:0003755
Gma11g00969 236 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00969 Gma-Chr11 8229562 8235141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00969 73 224 U-box Gene Family AT5G67530 43.137 9.39e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00969 - - gmx:100800775 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00297 12 2380002 2385362 Gma11g00969 11 8229562 8235141 GST